Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Gm10819-201ENSMUST00000099988 561 ntBASIC20.34■□□□□ 0.85
Trex1Q91XB0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.34■□□□□ 0.85
Trex1Q91XB0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trex1Q91XB0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trex1Q91XB0 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trex1Q91XB0 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trex1Q91XB0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trex1Q91XB0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Trex1Q91XB0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trex1Q91XB0 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.33■□□□□ 0.85
Trex1Q91XB0 Gm6728-201ENSMUST00000178117 1065 ntBASIC20.33■□□□□ 0.85
Trex1Q91XB0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trex1Q91XB0 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trex1Q91XB0 Gm7367-201ENSMUST00000057611 492 ntBASIC20.33■□□□□ 0.85
Trex1Q91XB0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trex1Q91XB0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trex1Q91XB0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trex1Q91XB0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.32■□□□□ 0.84
Trex1Q91XB0 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trex1Q91XB0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.32■□□□□ 0.84
Trex1Q91XB0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trex1Q91XB0 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trex1Q91XB0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trex1Q91XB0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trex1Q91XB0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.31■□□□□ 0.84
Trex1Q91XB0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trex1Q91XB0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Trex1Q91XB0 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trex1Q91XB0 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trex1Q91XB0 AA414768-201ENSMUST00000121924 1257 ntBASIC20.31■□□□□ 0.84
Trex1Q91XB0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.31■□□□□ 0.84
Trex1Q91XB0 Gm6345-202ENSMUST00000180900 204 ntBASIC20.31■□□□□ 0.84
Trex1Q91XB0 AC134329.2-201ENSMUST00000217897 428 ntBASIC20.31■□□□□ 0.84
Trex1Q91XB0 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trex1Q91XB0 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.31■□□□□ 0.84
Trex1Q91XB0 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trex1Q91XB0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trex1Q91XB0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trex1Q91XB0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trex1Q91XB0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trex1Q91XB0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trex1Q91XB0 Gm22697-201ENSMUST00000175194 63 ntBASIC20.3■□□□□ 0.84
Trex1Q91XB0 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.3■□□□□ 0.84
Trex1Q91XB0 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trex1Q91XB0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trex1Q91XB0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trex1Q91XB0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trex1Q91XB0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Trex1Q91XB0 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Gm18101-201ENSMUST00000215769 548 ntBASIC20.29■□□□□ 0.84
Trex1Q91XB0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.29■□□□□ 0.84
Trex1Q91XB0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Trex1Q91XB0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trex1Q91XB0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trex1Q91XB0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trex1Q91XB0 Gm16061-201ENSMUST00000122167 857 ntBASIC20.28■□□□□ 0.84
Trex1Q91XB0 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trex1Q91XB0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trex1Q91XB0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.28■□□□□ 0.84
Trex1Q91XB0 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trex1Q91XB0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trex1Q91XB0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trex1Q91XB0 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trex1Q91XB0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trex1Q91XB0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trex1Q91XB0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trex1Q91XB0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trex1Q91XB0 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trex1Q91XB0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trex1Q91XB0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trex1Q91XB0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trex1Q91XB0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms