Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Gm10138-203ENSMUST00000206952 366 ntBASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ddx41Q91VN6 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.25■□□□□ 0.83
Ddx41Q91VN6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx41Q91VN6 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx41Q91VN6 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ddx41Q91VN6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx41Q91VN6 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx41Q91VN6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx41Q91VN6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx41Q91VN6 Gm37055-201ENSMUST00000191866 133 ntBASIC20.25■□□□□ 0.83
Ddx41Q91VN6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC20.25■□□□□ 0.83
Ddx41Q91VN6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx41Q91VN6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx41Q91VN6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Ddx41Q91VN6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx41Q91VN6 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ddx41Q91VN6 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.25■□□□□ 0.83
Ddx41Q91VN6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ddx41Q91VN6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx41Q91VN6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx41Q91VN6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx41Q91VN6 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx41Q91VN6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx41Q91VN6 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.23■□□□□ 0.83
Ddx41Q91VN6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Ddx41Q91VN6 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ddx41Q91VN6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx41Q91VN6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx41Q91VN6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx41Q91VN6 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx41Q91VN6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx41Q91VN6 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ddx41Q91VN6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ddx41Q91VN6 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Gm15565-201ENSMUST00000118890 427 ntBASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Gm15375-201ENSMUST00000119510 849 ntBASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Gm43183-201ENSMUST00000200632 547 ntBASIC20.21■□□□□ 0.83
Ddx41Q91VN6 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC20.21■□□□□ 0.83
Ddx41Q91VN6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx41Q91VN6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ddx41Q91VN6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx41Q91VN6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx41Q91VN6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ddx41Q91VN6 Gm45560-201ENSMUST00000211492 1472 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms