Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tram1Q91V04 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tram1Q91V04 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Tram1Q91V04 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.26■□□□□ 0.03
Tram1Q91V04 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.25■□□□□ 0.03
Tram1Q91V04 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Gm12251-201ENSMUST00000117893 792 ntBASIC15.25■□□□□ 0.03
Tram1Q91V04 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.25■□□□□ 0.03
Tram1Q91V04 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.25■□□□□ 0.03
Tram1Q91V04 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tram1Q91V04 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.25■□□□□ 0.03
Tram1Q91V04 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Tram1Q91V04 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.25■□□□□ 0.03
Tram1Q91V04 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tram1Q91V04 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tram1Q91V04 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tram1Q91V04 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Tram1Q91V04 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tram1Q91V04 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tram1Q91V04 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tram1Q91V04 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tram1Q91V04 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tram1Q91V04 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tram1Q91V04 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tram1Q91V04 Gm45102-201ENSMUST00000207427 857 ntBASIC15.24■□□□□ 0.03
Tram1Q91V04 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tram1Q91V04 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tram1Q91V04 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tram1Q91V04 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Tram1Q91V04 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tram1Q91V04 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tram1Q91V04 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tram1Q91V04 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Tram1Q91V04 Haglr-201ENSMUST00000100000 2085 ntBASIC15.23■□□□□ 0.03
Tram1Q91V04 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Tram1Q91V04 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tram1Q91V04 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tram1Q91V04 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tram1Q91V04 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.23■□□□□ 0.03
Tram1Q91V04 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Tram1Q91V04 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.23■□□□□ 0.03
Tram1Q91V04 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tram1Q91V04 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Tram1Q91V04 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC15.23■□□□□ 0.03
Tram1Q91V04 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Tram1Q91V04 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tram1Q91V04 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.23■□□□□ 0.03
Tram1Q91V04 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Tram1Q91V04 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tram1Q91V04 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tram1Q91V04 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.22■□□□□ 0.03
Tram1Q91V04 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tram1Q91V04 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Tram1Q91V04 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tram1Q91V04 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tram1Q91V04 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tram1Q91V04 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.22■□□□□ 0.03
Tram1Q91V04 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.22■□□□□ 0.03
Tram1Q91V04 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tram1Q91V04 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tram1Q91V04 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tram1Q91V04 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.22■□□□□ 0.03
Tram1Q91V04 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tram1Q91V04 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tram1Q91V04 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tram1Q91V04 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Tram1Q91V04 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.22■□□□□ 0.03
Tram1Q91V04 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Tram1Q91V04 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tram1Q91V04 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.22■□□□□ 0.03
Tram1Q91V04 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.22■□□□□ 0.03
Tram1Q91V04 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Tram1Q91V04 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Tram1Q91V04 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Tram1Q91V04 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Tram1Q91V04 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tram1Q91V04 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms