Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb11Q91UZ8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb11Q91UZ8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb11Q91UZ8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb11Q91UZ8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb11Q91UZ8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb11Q91UZ8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb11Q91UZ8 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 Idnk-204ENSMUST00000226010 1898 ntBASIC18.12■□□□□ 0.49
Pcdhb11Q91UZ8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Gm13168-201ENSMUST00000121771 632 ntBASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb11Q91UZ8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb11Q91UZ8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb11Q91UZ8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb11Q91UZ8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhb11Q91UZ8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
Pcdhb11Q91UZ8 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdhb11Q91UZ8 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Pcdhb11Q91UZ8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.1■□□□□ 0.49
Pcdhb11Q91UZ8 Gm18025-201ENSMUST00000221733 862 ntBASIC18.1■□□□□ 0.49
Pcdhb11Q91UZ8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb11Q91UZ8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb11Q91UZ8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb11Q91UZ8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb11Q91UZ8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb11Q91UZ8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb11Q91UZ8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb11Q91UZ8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.09■□□□□ 0.49
Pcdhb11Q91UZ8 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms