Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q8VDP2 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q8VDP2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q8VDP2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q8VDP2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Q8VDP2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q8VDP2 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q8VDP2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q8VDP2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q8VDP2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Q8VDP2 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q8VDP2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Q8VDP2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.27■□□□□ 0.36
Q8VDP2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.27■□□□□ 0.36
Q8VDP2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Q8VDP2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Q8VDP2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Q8VDP2 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.27■□□□□ 0.35
Q8VDP2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Q8VDP2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Q8VDP2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Q8VDP2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Q8VDP2 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Q8VDP2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.26■□□□□ 0.35
Q8VDP2 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.26■□□□□ 0.35
Q8VDP2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Q8VDP2 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.26■□□□□ 0.35
Q8VDP2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Q8VDP2 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Q8VDP2 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Q8VDP2 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Q8VDP2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.26■□□□□ 0.35
Q8VDP2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Q8VDP2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Q8VDP2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Q8VDP2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.25■□□□□ 0.35
Q8VDP2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Q8VDP2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Q8VDP2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Q8VDP2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Q8VDP2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Q8VDP2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.24■□□□□ 0.35
Q8VDP2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Q8VDP2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Q8VDP2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8VDP2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8VDP2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Q8VDP2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8VDP2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Q8VDP2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms