Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rpap2Q8VC34 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpap2Q8VC34 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpap2Q8VC34 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpap2Q8VC34 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpap2Q8VC34 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpap2Q8VC34 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpap2Q8VC34 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpap2Q8VC34 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpap2Q8VC34 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpap2Q8VC34 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rpap2Q8VC34 Gm42545-201ENSMUST00000202755 922 ntBASIC19.43■□□□□ 0.7
Rpap2Q8VC34 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Rpap2Q8VC34 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpap2Q8VC34 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rpap2Q8VC34 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Rpap2Q8VC34 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.43■□□□□ 0.7
Rpap2Q8VC34 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.42■□□□□ 0.7
Rpap2Q8VC34 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpap2Q8VC34 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpap2Q8VC34 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpap2Q8VC34 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rpap2Q8VC34 Gm13401-201ENSMUST00000117074 291 ntBASIC19.42■□□□□ 0.7
Rpap2Q8VC34 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpap2Q8VC34 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.42■□□□□ 0.7
Rpap2Q8VC34 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Rpap2Q8VC34 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpap2Q8VC34 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpap2Q8VC34 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rpap2Q8VC34 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.41■□□□□ 0.7
Rpap2Q8VC34 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Rpap2Q8VC34 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpap2Q8VC34 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rpap2Q8VC34 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpap2Q8VC34 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpap2Q8VC34 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rpap2Q8VC34 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpap2Q8VC34 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpap2Q8VC34 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpap2Q8VC34 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rpap2Q8VC34 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rpap2Q8VC34 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Rpap2Q8VC34 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
Rpap2Q8VC34 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.41■□□□□ 0.7
Rpap2Q8VC34 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.41■□□□□ 0.7
Rpap2Q8VC34 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Gm6576-201ENSMUST00000169678 883 ntBASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rpap2Q8VC34 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rpap2Q8VC34 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Gm15378-201ENSMUST00000121894 207 ntBASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Mir8112-201ENSMUST00000184382 131 ntBASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Gm37292-201ENSMUST00000192062 758 ntBASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rpap2Q8VC34 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap2Q8VC34 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rpap2Q8VC34 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap2Q8VC34 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap2Q8VC34 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Rpap2Q8VC34 Gm13168-201ENSMUST00000121771 632 ntBASIC19.38■□□□□ 0.69
Rpap2Q8VC34 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap2Q8VC34 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rpap2Q8VC34 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rpap2Q8VC34 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms