Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
Top1mtQ8R4U6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Top1mtQ8R4U6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC21.18■□□□□ 0.98
Top1mtQ8R4U6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Top1mtQ8R4U6 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.18■□□□□ 0.98
Top1mtQ8R4U6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC21.18■□□□□ 0.98
Top1mtQ8R4U6 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Top1mtQ8R4U6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Top1mtQ8R4U6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Top1mtQ8R4U6 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Top1mtQ8R4U6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Top1mtQ8R4U6 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Top1mtQ8R4U6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.17■□□□□ 0.98
Top1mtQ8R4U6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Top1mtQ8R4U6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Top1mtQ8R4U6 Mir6349-201ENSMUST00000184059 97 ntBASIC21.17■□□□□ 0.98
Top1mtQ8R4U6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Top1mtQ8R4U6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
Top1mtQ8R4U6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Top1mtQ8R4U6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Top1mtQ8R4U6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Top1mtQ8R4U6 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Top1mtQ8R4U6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Top1mtQ8R4U6 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.17■□□□□ 0.98
Top1mtQ8R4U6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Top1mtQ8R4U6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Top1mtQ8R4U6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Gm10654-201ENSMUST00000098653 1633 ntBASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Gm10418-201ENSMUST00000100943 576 ntBASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Gm15375-201ENSMUST00000119510 849 ntBASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Top1mtQ8R4U6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Top1mtQ8R4U6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Top1mtQ8R4U6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Top1mtQ8R4U6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Top1mtQ8R4U6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Top1mtQ8R4U6 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC21.15■□□□□ 0.98
Top1mtQ8R4U6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Top1mtQ8R4U6 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.15■□□□□ 0.98
Top1mtQ8R4U6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Top1mtQ8R4U6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Top1mtQ8R4U6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
Top1mtQ8R4U6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Top1mtQ8R4U6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Top1mtQ8R4U6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Top1mtQ8R4U6 Gm45560-201ENSMUST00000211492 1472 ntBASIC21.14■□□□□ 0.98
Top1mtQ8R4U6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Top1mtQ8R4U6 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Top1mtQ8R4U6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Top1mtQ8R4U6 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Top1mtQ8R4U6 Gm13158-201ENSMUST00000122007 736 ntBASIC21.14■□□□□ 0.97
Top1mtQ8R4U6 Gm37856-201ENSMUST00000191634 999 ntBASIC21.14■□□□□ 0.97
Top1mtQ8R4U6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.14■□□□□ 0.97
Top1mtQ8R4U6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Top1mtQ8R4U6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Top1mtQ8R4U6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Top1mtQ8R4U6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Top1mtQ8R4U6 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Top1mtQ8R4U6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Top1mtQ8R4U6 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Top1mtQ8R4U6 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Top1mtQ8R4U6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Top1mtQ8R4U6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC21.13■□□□□ 0.97
Top1mtQ8R4U6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Top1mtQ8R4U6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Top1mtQ8R4U6 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC21.12■□□□□ 0.97
Top1mtQ8R4U6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Top1mtQ8R4U6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC21.12■□□□□ 0.97
Top1mtQ8R4U6 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Top1mtQ8R4U6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Top1mtQ8R4U6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Top1mtQ8R4U6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Top1mtQ8R4U6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Top1mtQ8R4U6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Top1mtQ8R4U6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC21.12■□□□□ 0.97
Top1mtQ8R4U6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Top1mtQ8R4U6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Top1mtQ8R4U6 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Top1mtQ8R4U6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Top1mtQ8R4U6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Top1mtQ8R4U6 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Top1mtQ8R4U6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Top1mtQ8R4U6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms