Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Gm12821-201ENSMUST00000120022 600 ntBASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Nup35Q8R4R6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Nup35Q8R4R6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup35Q8R4R6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup35Q8R4R6 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup35Q8R4R6 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup35Q8R4R6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup35Q8R4R6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup35Q8R4R6 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.46□□□□□ -0.09
Nup35Q8R4R6 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup35Q8R4R6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup35Q8R4R6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup35Q8R4R6 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.46□□□□□ -0.09
Nup35Q8R4R6 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nup35Q8R4R6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Nup35Q8R4R6 Gm43060-201ENSMUST00000200621 289 ntBASIC14.46□□□□□ -0.09
Nup35Q8R4R6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Nup35Q8R4R6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Nup35Q8R4R6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Nup35Q8R4R6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.46□□□□□ -0.1
Nup35Q8R4R6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup35Q8R4R6 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup35Q8R4R6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Nup35Q8R4R6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup35Q8R4R6 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup35Q8R4R6 Gm27454-201ENSMUST00000185090 204 ntBASIC14.45□□□□□ -0.1
Nup35Q8R4R6 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup35Q8R4R6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Nup35Q8R4R6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup35Q8R4R6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Nup35Q8R4R6 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Nup35Q8R4R6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Nup35Q8R4R6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup35Q8R4R6 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup35Q8R4R6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup35Q8R4R6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Nup35Q8R4R6 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Gm43017-201ENSMUST00000198296 752 ntBASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Nup35Q8R4R6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nup35Q8R4R6 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms