Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cd109Q8R422 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cd109Q8R422 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Cd109Q8R422 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Cd109Q8R422 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Cd109Q8R422 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
Cd109Q8R422 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Cd109Q8R422 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cd109Q8R422 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cd109Q8R422 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cd109Q8R422 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cd109Q8R422 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Cd109Q8R422 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
Cd109Q8R422 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
Cd109Q8R422 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC25.2■■□□□ 1.62
Cd109Q8R422 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Cd109Q8R422 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC25.2■■□□□ 1.62
Cd109Q8R422 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC25.2■■□□□ 1.62
Cd109Q8R422 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Cd109Q8R422 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Cd109Q8R422 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Cd109Q8R422 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cd109Q8R422 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cd109Q8R422 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Cd109Q8R422 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cd109Q8R422 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cd109Q8R422 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Cd109Q8R422 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC25.19■■□□□ 1.62
Cd109Q8R422 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Cd109Q8R422 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Cd109Q8R422 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC25.19■■□□□ 1.62
Cd109Q8R422 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
Cd109Q8R422 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC25.19■■□□□ 1.62
Cd109Q8R422 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC25.19■■□□□ 1.62
Cd109Q8R422 Gm17661-201ENSMUST00000170317 270 ntBASIC25.19■■□□□ 1.62
Cd109Q8R422 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Cd109Q8R422 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
Cd109Q8R422 Spsb2-203ENSMUST00000112473 1322 ntBASIC25.18■■□□□ 1.62
Cd109Q8R422 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Cd109Q8R422 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Cd109Q8R422 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cd109Q8R422 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Cd109Q8R422 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cd109Q8R422 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cd109Q8R422 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Cd109Q8R422 Gm21559-201ENSMUST00000220638 855 ntBASIC25.18■■□□□ 1.62
Cd109Q8R422 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC25.18■■□□□ 1.62
Cd109Q8R422 Gm8587-201ENSMUST00000076538 843 ntBASIC25.18■■□□□ 1.62
Cd109Q8R422 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Cd109Q8R422 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cd109Q8R422 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cd109Q8R422 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Cd109Q8R422 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cd109Q8R422 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cd109Q8R422 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC25.17■■□□□ 1.62
Cd109Q8R422 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC25.17■■□□□ 1.62
Cd109Q8R422 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cd109Q8R422 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Cd109Q8R422 Idnk-204ENSMUST00000226010 1898 ntBASIC25.16■■□□□ 1.62
Cd109Q8R422 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
Cd109Q8R422 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cd109Q8R422 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC25.16■■□□□ 1.62
Cd109Q8R422 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC25.16■■□□□ 1.62
Cd109Q8R422 AC120002.2-201ENSMUST00000220205 773 ntBASIC25.16■■□□□ 1.62
Cd109Q8R422 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cd109Q8R422 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Cd109Q8R422 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC25.16■■□□□ 1.62
Cd109Q8R422 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cd109Q8R422 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Cd109Q8R422 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cd109Q8R422 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Cd109Q8R422 Fst-202ENSMUST00000223640 2612 ntBASIC25.15■■□□□ 1.62
Cd109Q8R422 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cd109Q8R422 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Cd109Q8R422 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Cd109Q8R422 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Cd109Q8R422 Mir8112-201ENSMUST00000184382 131 ntBASIC25.14■■□□□ 1.62
Cd109Q8R422 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
Cd109Q8R422 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
Cd109Q8R422 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Cd109Q8R422 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cd109Q8R422 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cd109Q8R422 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC25.13■■□□□ 1.61
Cd109Q8R422 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cd109Q8R422 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Cd109Q8R422 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Cd109Q8R422 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC25.13■■□□□ 1.61
Cd109Q8R422 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Cd109Q8R422 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Cd109Q8R422 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC25.12■■□□□ 1.61
Cd109Q8R422 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC25.12■■□□□ 1.61
Cd109Q8R422 Gm7213-201ENSMUST00000215977 950 ntBASIC25.12■■□□□ 1.61
Cd109Q8R422 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cd109Q8R422 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Cd109Q8R422 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cd109Q8R422 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cd109Q8R422 Gm8258-201ENSMUST00000055593 1449 ntBASIC25.12■■□□□ 1.61
Cd109Q8R422 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cd109Q8R422 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Cd109Q8R422 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms