Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf3c5Q8R2T8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf3c5Q8R2T8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf3c5Q8R2T8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Gtf3c5Q8R2T8 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Gm22240-201ENSMUST00000175225 82 ntBASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Gm27011-201ENSMUST00000182352 972 ntBASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Gtf3c5Q8R2T8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c5Q8R2T8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c5Q8R2T8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c5Q8R2T8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c5Q8R2T8 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c5Q8R2T8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c5Q8R2T8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c5Q8R2T8 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c5Q8R2T8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c5Q8R2T8 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Gtf3c5Q8R2T8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c5Q8R2T8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c5Q8R2T8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c5Q8R2T8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c5Q8R2T8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Gtf3c5Q8R2T8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf3c5Q8R2T8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf3c5Q8R2T8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf3c5Q8R2T8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf3c5Q8R2T8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf3c5Q8R2T8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.66■□□□□ 0.9
Gtf3c5Q8R2T8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.66■□□□□ 0.9
Gtf3c5Q8R2T8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.66■□□□□ 0.9
Gtf3c5Q8R2T8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf3c5Q8R2T8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf3c5Q8R2T8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Gtf3c5Q8R2T8 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC20.66■□□□□ 0.9
Gtf3c5Q8R2T8 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c5Q8R2T8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c5Q8R2T8 Mir2861-201ENSMUST00000175539 82 ntBASIC20.65■□□□□ 0.9
Gtf3c5Q8R2T8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.65■□□□□ 0.9
Gtf3c5Q8R2T8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c5Q8R2T8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c5Q8R2T8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c5Q8R2T8 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.65■□□□□ 0.9
Gtf3c5Q8R2T8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c5Q8R2T8 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Gtf3c5Q8R2T8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC20.64■□□□□ 0.9
Gtf3c5Q8R2T8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gtf3c5Q8R2T8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gtf3c5Q8R2T8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Gtf3c5Q8R2T8 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.64■□□□□ 0.89
Gtf3c5Q8R2T8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gtf3c5Q8R2T8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gtf3c5Q8R2T8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.64■□□□□ 0.89
Gtf3c5Q8R2T8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Gtf3c5Q8R2T8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.64■□□□□ 0.89
Gtf3c5Q8R2T8 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.64■□□□□ 0.89
Gtf3c5Q8R2T8 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.64■□□□□ 0.89
Gtf3c5Q8R2T8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gtf3c5Q8R2T8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
Gtf3c5Q8R2T8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.64■□□□□ 0.89
Gtf3c5Q8R2T8 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gtf3c5Q8R2T8 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gtf3c5Q8R2T8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Gtf3c5Q8R2T8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gtf3c5Q8R2T8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gtf3c5Q8R2T8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gtf3c5Q8R2T8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.63■□□□□ 0.89
Gtf3c5Q8R2T8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.63■□□□□ 0.89
Gtf3c5Q8R2T8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Gtf3c5Q8R2T8 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.63■□□□□ 0.89
Gtf3c5Q8R2T8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gtf3c5Q8R2T8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gtf3c5Q8R2T8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Gtf3c5Q8R2T8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Gtf3c5Q8R2T8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf3c5Q8R2T8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.62■□□□□ 0.89
Gtf3c5Q8R2T8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Gtf3c5Q8R2T8 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.62■□□□□ 0.89
Gtf3c5Q8R2T8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf3c5Q8R2T8 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf3c5Q8R2T8 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf3c5Q8R2T8 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf3c5Q8R2T8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Gtf3c5Q8R2T8 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Gtf3c5Q8R2T8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Gtf3c5Q8R2T8 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms