Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim29Q8R2Q0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim29Q8R2Q0 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim29Q8R2Q0 Gm11927-201ENSMUST00000118472 759 ntBASIC20.25■□□□□ 0.83
Trim29Q8R2Q0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim29Q8R2Q0 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim29Q8R2Q0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.25■□□□□ 0.83
Trim29Q8R2Q0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trim29Q8R2Q0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim29Q8R2Q0 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim29Q8R2Q0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim29Q8R2Q0 Rarb-207ENSMUST00000225921 2756 ntBASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim29Q8R2Q0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim29Q8R2Q0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim29Q8R2Q0 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trim29Q8R2Q0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim29Q8R2Q0 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Trim29Q8R2Q0 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.23■□□□□ 0.83
Trim29Q8R2Q0 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim29Q8R2Q0 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim29Q8R2Q0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim29Q8R2Q0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim29Q8R2Q0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim29Q8R2Q0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim29Q8R2Q0 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim29Q8R2Q0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim29Q8R2Q0 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim29Q8R2Q0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim29Q8R2Q0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim29Q8R2Q0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim29Q8R2Q0 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim29Q8R2Q0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.22■□□□□ 0.83
Trim29Q8R2Q0 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trim29Q8R2Q0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.22■□□□□ 0.83
Trim29Q8R2Q0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim29Q8R2Q0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim29Q8R2Q0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim29Q8R2Q0 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim29Q8R2Q0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim29Q8R2Q0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim29Q8R2Q0 Gm12896-201ENSMUST00000118430 226 ntBASIC20.21■□□□□ 0.83
Trim29Q8R2Q0 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim29Q8R2Q0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim29Q8R2Q0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Trim29Q8R2Q0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim29Q8R2Q0 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trim29Q8R2Q0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim29Q8R2Q0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Trim29Q8R2Q0 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim29Q8R2Q0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Trim29Q8R2Q0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.2■□□□□ 0.82
Trim29Q8R2Q0 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim29Q8R2Q0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim29Q8R2Q0 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim29Q8R2Q0 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim29Q8R2Q0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim29Q8R2Q0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim29Q8R2Q0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim29Q8R2Q0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim29Q8R2Q0 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim29Q8R2Q0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim29Q8R2Q0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim29Q8R2Q0 Dio3-201ENSMUST00000097228 1449 ntBASIC20.19■□□□□ 0.82
Trim29Q8R2Q0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim29Q8R2Q0 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.19■□□□□ 0.82
Trim29Q8R2Q0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.19■□□□□ 0.82
Trim29Q8R2Q0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim29Q8R2Q0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim29Q8R2Q0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim29Q8R2Q0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trim29Q8R2Q0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim29Q8R2Q0 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim29Q8R2Q0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim29Q8R2Q0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim29Q8R2Q0 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim29Q8R2Q0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Trim29Q8R2Q0 Gm10418-201ENSMUST00000100943 576 ntBASIC20.18■□□□□ 0.82
Trim29Q8R2Q0 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim29Q8R2Q0 Gm12441-201ENSMUST00000121806 588 ntBASIC20.18■□□□□ 0.82
Trim29Q8R2Q0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trim29Q8R2Q0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.18■□□□□ 0.82
Trim29Q8R2Q0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim29Q8R2Q0 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.18■□□□□ 0.82
Trim29Q8R2Q0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim29Q8R2Q0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms