Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chmp7Q8R1T1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp7Q8R1T1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC22.66■■□□□ 1.22
Chmp7Q8R1T1 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp7Q8R1T1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp7Q8R1T1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp7Q8R1T1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp7Q8R1T1 Gm33142-201ENSMUST00000193913 867 ntBASIC22.66■■□□□ 1.22
Chmp7Q8R1T1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp7Q8R1T1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp7Q8R1T1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp7Q8R1T1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Chmp7Q8R1T1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chmp7Q8R1T1 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chmp7Q8R1T1 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chmp7Q8R1T1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Chmp7Q8R1T1 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC22.65■■□□□ 1.22
Chmp7Q8R1T1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Chmp7Q8R1T1 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Chmp7Q8R1T1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Chmp7Q8R1T1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.65■■□□□ 1.22
Chmp7Q8R1T1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chmp7Q8R1T1 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Chmp7Q8R1T1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chmp7Q8R1T1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chmp7Q8R1T1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chmp7Q8R1T1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
Chmp7Q8R1T1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Chmp7Q8R1T1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Chmp7Q8R1T1 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Chmp7Q8R1T1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC22.64■■□□□ 1.22
Chmp7Q8R1T1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC22.64■■□□□ 1.21
Chmp7Q8R1T1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Chmp7Q8R1T1 Gm13474-201ENSMUST00000122466 815 ntBASIC22.64■■□□□ 1.21
Chmp7Q8R1T1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Chmp7Q8R1T1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Chmp7Q8R1T1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Chmp7Q8R1T1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Chmp7Q8R1T1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chmp7Q8R1T1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC22.63■■□□□ 1.21
Chmp7Q8R1T1 Gm43213-201ENSMUST00000151866 1790 ntBASIC22.63■■□□□ 1.21
Chmp7Q8R1T1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chmp7Q8R1T1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chmp7Q8R1T1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Chmp7Q8R1T1 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Chmp7Q8R1T1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chmp7Q8R1T1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chmp7Q8R1T1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chmp7Q8R1T1 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
Chmp7Q8R1T1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chmp7Q8R1T1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chmp7Q8R1T1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC22.61■■□□□ 1.21
Chmp7Q8R1T1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chmp7Q8R1T1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chmp7Q8R1T1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC22.61■■□□□ 1.21
Chmp7Q8R1T1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Chmp7Q8R1T1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
Chmp7Q8R1T1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Chmp7Q8R1T1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chmp7Q8R1T1 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chmp7Q8R1T1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Chmp7Q8R1T1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chmp7Q8R1T1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chmp7Q8R1T1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Chmp7Q8R1T1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC22.6■■□□□ 1.21
Chmp7Q8R1T1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Chmp7Q8R1T1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Chmp7Q8R1T1 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
Chmp7Q8R1T1 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Chmp7Q8R1T1 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC22.6■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms