Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tm6sf2Q8R1J1 Gm715-201ENSMUST00000117865 831 ntBASIC16.62■□□□□ 0.25
Tm6sf2Q8R1J1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tm6sf2Q8R1J1 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC16.62■□□□□ 0.25
Tm6sf2Q8R1J1 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.62■□□□□ 0.25
Tm6sf2Q8R1J1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.62■□□□□ 0.25
Tm6sf2Q8R1J1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tm6sf2Q8R1J1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Tm6sf2Q8R1J1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tm6sf2Q8R1J1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tm6sf2Q8R1J1 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tm6sf2Q8R1J1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tm6sf2Q8R1J1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Tm6sf2Q8R1J1 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Gm11643-201ENSMUST00000119578 864 ntBASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tm6sf2Q8R1J1 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Gm10418-201ENSMUST00000100943 576 ntBASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Gm29791-202ENSMUST00000207888 369 ntBASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tm6sf2Q8R1J1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
Tm6sf2Q8R1J1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tm6sf2Q8R1J1 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tm6sf2Q8R1J1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.58■□□□□ 0.24
Tm6sf2Q8R1J1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tm6sf2Q8R1J1 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Tm6sf2Q8R1J1 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.58■□□□□ 0.24
Tm6sf2Q8R1J1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tm6sf2Q8R1J1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Tm6sf2Q8R1J1 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tm6sf2Q8R1J1 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tm6sf2Q8R1J1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tm6sf2Q8R1J1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tm6sf2Q8R1J1 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tm6sf2Q8R1J1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Tm6sf2Q8R1J1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tm6sf2Q8R1J1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Tm6sf2Q8R1J1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Tm6sf2Q8R1J1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms