Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Vopp1Q8R1C3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.88■□□□□ 0.61
Vopp1Q8R1C3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Vopp1Q8R1C3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Vopp1Q8R1C3 Gm10013-201ENSMUST00000106074 672 ntBASIC18.87■□□□□ 0.61
Vopp1Q8R1C3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vopp1Q8R1C3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.87■□□□□ 0.61
Vopp1Q8R1C3 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Vopp1Q8R1C3 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vopp1Q8R1C3 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vopp1Q8R1C3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.87■□□□□ 0.61
Vopp1Q8R1C3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.87■□□□□ 0.61
Vopp1Q8R1C3 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.87■□□□□ 0.61
Vopp1Q8R1C3 Gm9731-201ENSMUST00000209480 747 ntBASIC18.87■□□□□ 0.61
Vopp1Q8R1C3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Vopp1Q8R1C3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vopp1Q8R1C3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Vopp1Q8R1C3 Gm10819-201ENSMUST00000099988 561 ntBASIC18.87■□□□□ 0.61
Vopp1Q8R1C3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Vopp1Q8R1C3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.86■□□□□ 0.61
Vopp1Q8R1C3 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vopp1Q8R1C3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vopp1Q8R1C3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vopp1Q8R1C3 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Vopp1Q8R1C3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.86■□□□□ 0.61
Vopp1Q8R1C3 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vopp1Q8R1C3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vopp1Q8R1C3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Vopp1Q8R1C3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Vopp1Q8R1C3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vopp1Q8R1C3 Gm16061-201ENSMUST00000122167 857 ntBASIC18.86■□□□□ 0.61
Vopp1Q8R1C3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Vopp1Q8R1C3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.86■□□□□ 0.61
Vopp1Q8R1C3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Vopp1Q8R1C3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vopp1Q8R1C3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Vopp1Q8R1C3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Vopp1Q8R1C3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vopp1Q8R1C3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.85■□□□□ 0.61
Vopp1Q8R1C3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Vopp1Q8R1C3 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.85■□□□□ 0.61
Vopp1Q8R1C3 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.85■□□□□ 0.61
Vopp1Q8R1C3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vopp1Q8R1C3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vopp1Q8R1C3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vopp1Q8R1C3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vopp1Q8R1C3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Vopp1Q8R1C3 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.85■□□□□ 0.61
Vopp1Q8R1C3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 Gm17661-201ENSMUST00000170317 270 ntBASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vopp1Q8R1C3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vopp1Q8R1C3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.83■□□□□ 0.61
Vopp1Q8R1C3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Vopp1Q8R1C3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vopp1Q8R1C3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.83■□□□□ 0.61
Vopp1Q8R1C3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Vopp1Q8R1C3 Gm22697-201ENSMUST00000175194 63 ntBASIC18.83■□□□□ 0.6
Vopp1Q8R1C3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.83■□□□□ 0.6
Vopp1Q8R1C3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vopp1Q8R1C3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vopp1Q8R1C3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vopp1Q8R1C3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Gm21362-201ENSMUST00000194272 928 ntBASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Gm37025-201ENSMUST00000195159 829 ntBASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Vopp1Q8R1C3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vopp1Q8R1C3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vopp1Q8R1C3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vopp1Q8R1C3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vopp1Q8R1C3 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.81■□□□□ 0.6
Vopp1Q8R1C3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vopp1Q8R1C3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms