Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28aQ8K3Y3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.53■□□□□ 0.24
Lin28aQ8K3Y3 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Lin28aQ8K3Y3 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28aQ8K3Y3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Lin28aQ8K3Y3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28aQ8K3Y3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.53■□□□□ 0.24
Lin28aQ8K3Y3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28aQ8K3Y3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Lin28aQ8K3Y3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Lin28aQ8K3Y3 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.52■□□□□ 0.24
Lin28aQ8K3Y3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28aQ8K3Y3 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28aQ8K3Y3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28aQ8K3Y3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28aQ8K3Y3 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28aQ8K3Y3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28aQ8K3Y3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.52■□□□□ 0.24
Lin28aQ8K3Y3 Gm37055-201ENSMUST00000191866 133 ntBASIC16.52■□□□□ 0.24
Lin28aQ8K3Y3 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28aQ8K3Y3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Lin28aQ8K3Y3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lin28aQ8K3Y3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Lin28aQ8K3Y3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lin28aQ8K3Y3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Lin28aQ8K3Y3 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.52■□□□□ 0.23
Lin28aQ8K3Y3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28aQ8K3Y3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28aQ8K3Y3 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28aQ8K3Y3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Lin28aQ8K3Y3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28aQ8K3Y3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28aQ8K3Y3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28aQ8K3Y3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28aQ8K3Y3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.51■□□□□ 0.23
Lin28aQ8K3Y3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28aQ8K3Y3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28aQ8K3Y3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Lin28aQ8K3Y3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Lin28aQ8K3Y3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Lin28aQ8K3Y3 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Lin28aQ8K3Y3 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Lin28aQ8K3Y3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Gm15565-201ENSMUST00000118890 427 ntBASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Mir5122-201ENSMUST00000175004 89 ntBASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Gm5417-201ENSMUST00000079706 384 ntBASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Lin28aQ8K3Y3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28aQ8K3Y3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.48■□□□□ 0.23
Lin28aQ8K3Y3 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28aQ8K3Y3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28aQ8K3Y3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28aQ8K3Y3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28aQ8K3Y3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28aQ8K3Y3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28aQ8K3Y3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28aQ8K3Y3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28aQ8K3Y3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lin28aQ8K3Y3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.48■□□□□ 0.23
Lin28aQ8K3Y3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms