Protein–RNA interactions for Protein: Q8K299

Scara5, Scavenger receptor class A member 5, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5Q8K299 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Scara5Q8K299 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scara5Q8K299 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scara5Q8K299 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scara5Q8K299 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Scara5Q8K299 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scara5Q8K299 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scara5Q8K299 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scara5Q8K299 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scara5Q8K299 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Scara5Q8K299 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scara5Q8K299 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Scara5Q8K299 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Scara5Q8K299 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.68■□□□□ 0.42
Scara5Q8K299 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scara5Q8K299 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scara5Q8K299 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.68■□□□□ 0.42
Scara5Q8K299 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scara5Q8K299 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Scara5Q8K299 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scara5Q8K299 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.68■□□□□ 0.42
Scara5Q8K299 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.68■□□□□ 0.42
Scara5Q8K299 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scara5Q8K299 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scara5Q8K299 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scara5Q8K299 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scara5Q8K299 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Scara5Q8K299 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scara5Q8K299 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scara5Q8K299 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scara5Q8K299 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.68■□□□□ 0.42
Scara5Q8K299 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scara5Q8K299 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Scara5Q8K299 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scara5Q8K299 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scara5Q8K299 Gm7284-201ENSMUST00000131667 944 ntBASIC17.67■□□□□ 0.42
Scara5Q8K299 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.67■□□□□ 0.42
Scara5Q8K299 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scara5Q8K299 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scara5Q8K299 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scara5Q8K299 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Scara5Q8K299 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Scara5Q8K299 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scara5Q8K299 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Scara5Q8K299 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scara5Q8K299 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scara5Q8K299 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.66■□□□□ 0.42
Scara5Q8K299 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Scara5Q8K299 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scara5Q8K299 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.66■□□□□ 0.42
Scara5Q8K299 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scara5Q8K299 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scara5Q8K299 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scara5Q8K299 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scara5Q8K299 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scara5Q8K299 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.65■□□□□ 0.42
Scara5Q8K299 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.65■□□□□ 0.42
Scara5Q8K299 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.65■□□□□ 0.42
Scara5Q8K299 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.65■□□□□ 0.42
Scara5Q8K299 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.65■□□□□ 0.42
Scara5Q8K299 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Scara5Q8K299 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.65■□□□□ 0.42
Scara5Q8K299 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Scara5Q8K299 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Scara5Q8K299 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Scara5Q8K299 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Scara5Q8K299 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scara5Q8K299 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scara5Q8K299 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.64■□□□□ 0.41
Scara5Q8K299 Gm17971-201ENSMUST00000190239 806 ntBASIC17.64■□□□□ 0.41
Scara5Q8K299 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scara5Q8K299 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.64■□□□□ 0.41
Scara5Q8K299 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scara5Q8K299 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Scara5Q8K299 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scara5Q8K299 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Scara5Q8K299 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Scara5Q8K299 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scara5Q8K299 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Scara5Q8K299 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scara5Q8K299 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.63■□□□□ 0.41
Scara5Q8K299 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.63■□□□□ 0.41
Scara5Q8K299 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scara5Q8K299 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Scara5Q8K299 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms