Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Hmgcll1Q8JZS7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Hmgcll1Q8JZS7 Gm38027-201ENSMUST00000192315 235 ntBASIC18.26■□□□□ 0.51
Hmgcll1Q8JZS7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.26■□□□□ 0.51
Hmgcll1Q8JZS7 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.26■□□□□ 0.51
Hmgcll1Q8JZS7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.26■□□□□ 0.51
Hmgcll1Q8JZS7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgcll1Q8JZS7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgcll1Q8JZS7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgcll1Q8JZS7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Hmgcll1Q8JZS7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Hmgcll1Q8JZS7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Gm11539-201ENSMUST00000119837 557 ntBASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Gm13436-201ENSMUST00000120418 567 ntBASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Hmgcll1Q8JZS7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Gm6433-201ENSMUST00000118634 875 ntBASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Gm13559-201ENSMUST00000120476 863 ntBASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Gm9987-201ENSMUST00000069768 567 ntBASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Hmgcll1Q8JZS7 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcll1Q8JZS7 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcll1Q8JZS7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcll1Q8JZS7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcll1Q8JZS7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
Hmgcll1Q8JZS7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.23■□□□□ 0.51
Hmgcll1Q8JZS7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcll1Q8JZS7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.23■□□□□ 0.51
Hmgcll1Q8JZS7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcll1Q8JZS7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcll1Q8JZS7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcll1Q8JZS7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcll1Q8JZS7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Hmgcll1Q8JZS7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Hmgcll1Q8JZS7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Gm13836-201ENSMUST00000121159 501 ntBASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Hmgcll1Q8JZS7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcll1Q8JZS7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Hmgcll1Q8JZS7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcll1Q8JZS7 Gm24841-201ENSMUST00000158676 357 ntBASIC18.21■□□□□ 0.51
Hmgcll1Q8JZS7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcll1Q8JZS7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcll1Q8JZS7 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.21■□□□□ 0.51
Hmgcll1Q8JZS7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcll1Q8JZS7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcll1Q8JZS7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Hmgcll1Q8JZS7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms