Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Trpm6Q8CIR4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trpm6Q8CIR4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.79■□□□□ 0.44
Trpm6Q8CIR4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trpm6Q8CIR4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.79■□□□□ 0.44
Trpm6Q8CIR4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trpm6Q8CIR4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trpm6Q8CIR4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Trpm6Q8CIR4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trpm6Q8CIR4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Gm37025-201ENSMUST00000195159 829 ntBASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.78■□□□□ 0.44
Trpm6Q8CIR4 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trpm6Q8CIR4 Gm29791-202ENSMUST00000207888 369 ntBASIC17.77■□□□□ 0.44
Trpm6Q8CIR4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trpm6Q8CIR4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trpm6Q8CIR4 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trpm6Q8CIR4 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trpm6Q8CIR4 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trpm6Q8CIR4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.77■□□□□ 0.44
Trpm6Q8CIR4 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trpm6Q8CIR4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trpm6Q8CIR4 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.77■□□□□ 0.43
Trpm6Q8CIR4 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Trpm6Q8CIR4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trpm6Q8CIR4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.77■□□□□ 0.43
Trpm6Q8CIR4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.77■□□□□ 0.43
Trpm6Q8CIR4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trpm6Q8CIR4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Trpm6Q8CIR4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trpm6Q8CIR4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Trpm6Q8CIR4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trpm6Q8CIR4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trpm6Q8CIR4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 Gm7791-201ENSMUST00000219066 539 ntBASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trpm6Q8CIR4 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trpm6Q8CIR4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trpm6Q8CIR4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trpm6Q8CIR4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.75■□□□□ 0.43
Trpm6Q8CIR4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trpm6Q8CIR4 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trpm6Q8CIR4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trpm6Q8CIR4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trpm6Q8CIR4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trpm6Q8CIR4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trpm6Q8CIR4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trpm6Q8CIR4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trpm6Q8CIR4 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trpm6Q8CIR4 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.74■□□□□ 0.43
Trpm6Q8CIR4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trpm6Q8CIR4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trpm6Q8CIR4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Trpm6Q8CIR4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Trpm6Q8CIR4 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trpm6Q8CIR4 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trpm6Q8CIR4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.74■□□□□ 0.43
Trpm6Q8CIR4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trpm6Q8CIR4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.74■□□□□ 0.43
Trpm6Q8CIR4 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.74■□□□□ 0.43
Trpm6Q8CIR4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trpm6Q8CIR4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trpm6Q8CIR4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trpm6Q8CIR4 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.73■□□□□ 0.43
Trpm6Q8CIR4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Trpm6Q8CIR4 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
Trpm6Q8CIR4 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms