Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm9731-201ENSMUST00000209480 747 ntBASIC20.07■□□□□ 0.8
Syne4Q8CII8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Syne4Q8CII8 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Syne4Q8CII8 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Syne4Q8CII8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Syne4Q8CII8 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Syne4Q8CII8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Syne4Q8CII8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syne4Q8CII8 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syne4Q8CII8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syne4Q8CII8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syne4Q8CII8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syne4Q8CII8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.06■□□□□ 0.8
Syne4Q8CII8 Il3ra-202ENSMUST00000223589 738 ntBASIC20.06■□□□□ 0.8
Syne4Q8CII8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Syne4Q8CII8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syne4Q8CII8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syne4Q8CII8 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syne4Q8CII8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syne4Q8CII8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Syne4Q8CII8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syne4Q8CII8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syne4Q8CII8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Syne4Q8CII8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syne4Q8CII8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.05■□□□□ 0.8
Syne4Q8CII8 AC120002.2-201ENSMUST00000220205 773 ntBASIC20.05■□□□□ 0.8
Syne4Q8CII8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syne4Q8CII8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Syne4Q8CII8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Syne4Q8CII8 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.05■□□□□ 0.8
Syne4Q8CII8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Syne4Q8CII8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syne4Q8CII8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syne4Q8CII8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
Syne4Q8CII8 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Syne4Q8CII8 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Syne4Q8CII8 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syne4Q8CII8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syne4Q8CII8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.04■□□□□ 0.8
Syne4Q8CII8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syne4Q8CII8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Syne4Q8CII8 Gm37025-201ENSMUST00000195159 829 ntBASIC20.04■□□□□ 0.8
Syne4Q8CII8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.04■□□□□ 0.8
Syne4Q8CII8 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syne4Q8CII8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Syne4Q8CII8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Syne4Q8CII8 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Syne4Q8CII8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Syne4Q8CII8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syne4Q8CII8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syne4Q8CII8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Syne4Q8CII8 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.03■□□□□ 0.8
Syne4Q8CII8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syne4Q8CII8 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syne4Q8CII8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.03■□□□□ 0.8
Syne4Q8CII8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syne4Q8CII8 Gm29791-202ENSMUST00000207888 369 ntBASIC20.03■□□□□ 0.8
Syne4Q8CII8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.03■□□□□ 0.8
Syne4Q8CII8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syne4Q8CII8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Syne4Q8CII8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Syne4Q8CII8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syne4Q8CII8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syne4Q8CII8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syne4Q8CII8 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Syne4Q8CII8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Syne4Q8CII8 Gm11950-201ENSMUST00000121615 838 ntBASIC20.02■□□□□ 0.8
Syne4Q8CII8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Syne4Q8CII8 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Syne4Q8CII8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Syne4Q8CII8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Syne4Q8CII8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Syne4Q8CII8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Gm26039-201ENSMUST00000158152 144 ntBASIC20.01■□□□□ 0.79
Syne4Q8CII8 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.01■□□□□ 0.79
Syne4Q8CII8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Syne4Q8CII8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Syne4Q8CII8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20■□□□□ 0.79
Syne4Q8CII8 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Syne4Q8CII8 Mir3081-201ENSMUST00000175305 84 ntBASIC20■□□□□ 0.79
Syne4Q8CII8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Syne4Q8CII8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms