Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Clip4Q8CI96 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Clip4Q8CI96 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.83■□□□□ 0.45
Clip4Q8CI96 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.83■□□□□ 0.45
Clip4Q8CI96 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Clip4Q8CI96 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.83■□□□□ 0.44
Clip4Q8CI96 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clip4Q8CI96 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clip4Q8CI96 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Clip4Q8CI96 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Clip4Q8CI96 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.82■□□□□ 0.44
Clip4Q8CI96 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.82■□□□□ 0.44
Clip4Q8CI96 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Clip4Q8CI96 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.81■□□□□ 0.44
Clip4Q8CI96 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.81■□□□□ 0.44
Clip4Q8CI96 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Clip4Q8CI96 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.8■□□□□ 0.44
Clip4Q8CI96 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.8■□□□□ 0.44
Clip4Q8CI96 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.79■□□□□ 0.44
Clip4Q8CI96 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clip4Q8CI96 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clip4Q8CI96 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.79■□□□□ 0.44
Clip4Q8CI96 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.79■□□□□ 0.44
Clip4Q8CI96 Gm20760-201ENSMUST00000179197 648 ntBASIC17.79■□□□□ 0.44
Clip4Q8CI96 Gm44549-201ENSMUST00000208351 577 ntBASIC17.79■□□□□ 0.44
Clip4Q8CI96 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.79■□□□□ 0.44
Clip4Q8CI96 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clip4Q8CI96 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clip4Q8CI96 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Clip4Q8CI96 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clip4Q8CI96 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Clip4Q8CI96 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Clip4Q8CI96 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Clip4Q8CI96 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clip4Q8CI96 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clip4Q8CI96 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.78■□□□□ 0.44
Clip4Q8CI96 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Clip4Q8CI96 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Clip4Q8CI96 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Clip4Q8CI96 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.78■□□□□ 0.44
Clip4Q8CI96 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Clip4Q8CI96 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Clip4Q8CI96 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms