Protein–RNA interactions for Protein: Q8CH20

Cypt1, Cysteine-rich perinuclear theca protein 1, mousemouse

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cypt1Q8CH20 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cypt1Q8CH20 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Cypt1Q8CH20 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cypt1Q8CH20 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Gm13461-201ENSMUST00000120980 662 ntBASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Gm10499-201ENSMUST00000174094 934 ntBASIC22.34■■□□□ 1.17
Cypt1Q8CH20 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cypt1Q8CH20 AC154266.1-201ENSMUST00000223190 503 ntBASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Cypt1Q8CH20 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cypt1Q8CH20 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cypt1Q8CH20 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cypt1Q8CH20 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Cypt1Q8CH20 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC22.33■■□□□ 1.17
Cypt1Q8CH20 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
Cypt1Q8CH20 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC22.33■■□□□ 1.17
Cypt1Q8CH20 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cypt1Q8CH20 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC22.33■■□□□ 1.17
Cypt1Q8CH20 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cypt1Q8CH20 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
Cypt1Q8CH20 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cypt1Q8CH20 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Cypt1Q8CH20 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC22.32■■□□□ 1.16
Cypt1Q8CH20 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC22.32■■□□□ 1.16
Cypt1Q8CH20 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC22.32■■□□□ 1.16
Cypt1Q8CH20 AC131709.1-201ENSMUST00000224731 1180 ntBASIC22.32■■□□□ 1.16
Cypt1Q8CH20 Wdyhv1-203ENSMUST00000226889 394 ntBASIC22.32■■□□□ 1.16
Cypt1Q8CH20 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cypt1Q8CH20 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Cypt1Q8CH20 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.32■■□□□ 1.16
Cypt1Q8CH20 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cypt1Q8CH20 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cypt1Q8CH20 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC22.31■■□□□ 1.16
Cypt1Q8CH20 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cypt1Q8CH20 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cypt1Q8CH20 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
Cypt1Q8CH20 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cypt1Q8CH20 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cypt1Q8CH20 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Cypt1Q8CH20 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cypt1Q8CH20 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cypt1Q8CH20 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cypt1Q8CH20 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cypt1Q8CH20 Gm16570-201ENSMUST00000161951 436 ntBASIC22.3■■□□□ 1.16
Cypt1Q8CH20 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC22.3■■□□□ 1.16
Cypt1Q8CH20 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cypt1Q8CH20 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cypt1Q8CH20 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cypt1Q8CH20 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC22.29■■□□□ 1.16
Cypt1Q8CH20 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cypt1Q8CH20 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cypt1Q8CH20 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Cypt1Q8CH20 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cypt1Q8CH20 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cypt1Q8CH20 Gm7856-201ENSMUST00000117514 1493 ntBASIC22.28■■□□□ 1.16
Cypt1Q8CH20 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cypt1Q8CH20 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cypt1Q8CH20 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cypt1Q8CH20 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cypt1Q8CH20 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cypt1Q8CH20 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cypt1Q8CH20 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cypt1Q8CH20 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cypt1Q8CH20 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cypt1Q8CH20 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cypt1Q8CH20 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cypt1Q8CH20 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cypt1Q8CH20 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.27■■□□□ 1.16
Cypt1Q8CH20 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cypt1Q8CH20 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
Cypt1Q8CH20 Mir1895-201ENSMUST00000122615 79 ntBASIC22.27■■□□□ 1.16
Cypt1Q8CH20 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cypt1Q8CH20 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC22.27■■□□□ 1.16
Cypt1Q8CH20 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cypt1Q8CH20 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC22.27■■□□□ 1.16
Cypt1Q8CH20 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC22.27■■□□□ 1.16
Cypt1Q8CH20 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
Cypt1Q8CH20 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cypt1Q8CH20 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC22.26■■□□□ 1.15
Cypt1Q8CH20 AC124732.2-201ENSMUST00000221977 316 ntBASIC22.26■■□□□ 1.15
Cypt1Q8CH20 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cypt1Q8CH20 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cypt1Q8CH20 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Cypt1Q8CH20 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cypt1Q8CH20 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cypt1Q8CH20 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cypt1Q8CH20 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cypt1Q8CH20 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms