Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rbm28Q8CGC6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rbm28Q8CGC6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rbm28Q8CGC6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rbm28Q8CGC6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rbm28Q8CGC6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Rbm28Q8CGC6 Gm21814-202ENSMUST00000203277 873 ntBASIC20.93■□□□□ 0.94
Rbm28Q8CGC6 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.93■□□□□ 0.94
Rbm28Q8CGC6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rbm28Q8CGC6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rbm28Q8CGC6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rbm28Q8CGC6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rbm28Q8CGC6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rbm28Q8CGC6 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rbm28Q8CGC6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rbm28Q8CGC6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rbm28Q8CGC6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.92■□□□□ 0.94
Rbm28Q8CGC6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rbm28Q8CGC6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rbm28Q8CGC6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rbm28Q8CGC6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rbm28Q8CGC6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rbm28Q8CGC6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rbm28Q8CGC6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.91■□□□□ 0.94
Rbm28Q8CGC6 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.91■□□□□ 0.94
Rbm28Q8CGC6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rbm28Q8CGC6 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rbm28Q8CGC6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Gm11643-201ENSMUST00000119578 864 ntBASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rbm28Q8CGC6 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rbm28Q8CGC6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rbm28Q8CGC6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rbm28Q8CGC6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rbm28Q8CGC6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rbm28Q8CGC6 Fst-202ENSMUST00000223640 2612 ntBASIC20.88■□□□□ 0.93
Rbm28Q8CGC6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rbm28Q8CGC6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Rbm28Q8CGC6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rbm28Q8CGC6 Gm10654-201ENSMUST00000098653 1633 ntBASIC20.88■□□□□ 0.93
Rbm28Q8CGC6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Rbm28Q8CGC6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rbm28Q8CGC6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rbm28Q8CGC6 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rbm28Q8CGC6 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rbm28Q8CGC6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC20.87■□□□□ 0.93
Rbm28Q8CGC6 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Rbm28Q8CGC6 Mir2861-201ENSMUST00000175539 82 ntBASIC20.87■□□□□ 0.93
Rbm28Q8CGC6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.87■□□□□ 0.93
Rbm28Q8CGC6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.87■□□□□ 0.93
Rbm28Q8CGC6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rbm28Q8CGC6 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rbm28Q8CGC6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rbm28Q8CGC6 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rbm28Q8CGC6 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rbm28Q8CGC6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Gm43799-201ENSMUST00000201845 579 ntBASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Odf3b-204ENSMUST00000227834 930 ntBASIC20.86■□□□□ 0.93
Rbm28Q8CGC6 Gm9987-201ENSMUST00000069768 567 ntBASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms