Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc4Q8CG47 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc4Q8CG47 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Smc4Q8CG47 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC21.83■■□□□ 1.09
Smc4Q8CG47 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Smc4Q8CG47 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC21.83■■□□□ 1.09
Smc4Q8CG47 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.83■■□□□ 1.09
Smc4Q8CG47 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smc4Q8CG47 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Smc4Q8CG47 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Smc4Q8CG47 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smc4Q8CG47 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smc4Q8CG47 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc4Q8CG47 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc4Q8CG47 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc4Q8CG47 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.82■■□□□ 1.08
Smc4Q8CG47 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.82■■□□□ 1.08
Smc4Q8CG47 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Smc4Q8CG47 Gm6433-201ENSMUST00000118634 875 ntBASIC21.82■■□□□ 1.08
Smc4Q8CG47 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC21.82■■□□□ 1.08
Smc4Q8CG47 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smc4Q8CG47 Gm43799-201ENSMUST00000201845 579 ntBASIC21.82■■□□□ 1.08
Smc4Q8CG47 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc4Q8CG47 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Smc4Q8CG47 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.82■■□□□ 1.08
Smc4Q8CG47 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Smc4Q8CG47 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Smc4Q8CG47 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc4Q8CG47 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc4Q8CG47 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC21.81■■□□□ 1.08
Smc4Q8CG47 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc4Q8CG47 Gm12085-201ENSMUST00000119263 940 ntBASIC21.81■■□□□ 1.08
Smc4Q8CG47 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc4Q8CG47 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc4Q8CG47 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smc4Q8CG47 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Iqck-206ENSMUST00000208658 2891 ntBASIC21.8■■□□□ 1.08
Smc4Q8CG47 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Smc4Q8CG47 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smc4Q8CG47 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc4Q8CG47 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.79■■□□□ 1.08
Smc4Q8CG47 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc4Q8CG47 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc4Q8CG47 Gm13401-201ENSMUST00000117074 291 ntBASIC21.79■■□□□ 1.08
Smc4Q8CG47 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smc4Q8CG47 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc4Q8CG47 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.79■■□□□ 1.08
Smc4Q8CG47 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc4Q8CG47 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc4Q8CG47 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc4Q8CG47 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smc4Q8CG47 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Smc4Q8CG47 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Smc4Q8CG47 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc4Q8CG47 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Smc4Q8CG47 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc4Q8CG47 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc4Q8CG47 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Smc4Q8CG47 Gm38027-201ENSMUST00000192315 235 ntBASIC21.78■■□□□ 1.08
Smc4Q8CG47 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc4Q8CG47 Gm9987-201ENSMUST00000069768 567 ntBASIC21.78■■□□□ 1.08
Smc4Q8CG47 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Smc4Q8CG47 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc4Q8CG47 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc4Q8CG47 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc4Q8CG47 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.78■■□□□ 1.08
Smc4Q8CG47 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc4Q8CG47 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.78■■□□□ 1.08
Smc4Q8CG47 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Smc4Q8CG47 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smc4Q8CG47 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Smc4Q8CG47 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc4Q8CG47 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc4Q8CG47 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Smc4Q8CG47 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Smc4Q8CG47 Fst-202ENSMUST00000223640 2612 ntBASIC21.77■■□□□ 1.08
Smc4Q8CG47 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smc4Q8CG47 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms