Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Gm43034-201ENSMUST00000198678 1364 ntBASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc28bQ8CEG5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Gm6139-201ENSMUST00000079261 882 ntBASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc28bQ8CEG5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 Gm13146-201ENSMUST00000118508 780 ntBASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ccdc28bQ8CEG5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28bQ8CEG5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28bQ8CEG5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28bQ8CEG5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28bQ8CEG5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.48■□□□□ 0.39
Ccdc28bQ8CEG5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28bQ8CEG5 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ccdc28bQ8CEG5 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28bQ8CEG5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28bQ8CEG5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ccdc28bQ8CEG5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28bQ8CEG5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28bQ8CEG5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ccdc28bQ8CEG5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28bQ8CEG5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28bQ8CEG5 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28bQ8CEG5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28bQ8CEG5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28bQ8CEG5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28bQ8CEG5 Gm12821-201ENSMUST00000120022 600 ntBASIC17.47■□□□□ 0.39
Ccdc28bQ8CEG5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28bQ8CEG5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28bQ8CEG5 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28bQ8CEG5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28bQ8CEG5 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28bQ8CEG5 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28bQ8CEG5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28bQ8CEG5 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Ccdc28bQ8CEG5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc28bQ8CEG5 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28bQ8CEG5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28bQ8CEG5 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ccdc28bQ8CEG5 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28bQ8CEG5 Gm13534-201ENSMUST00000121169 513 ntBASIC17.46■□□□□ 0.39
Ccdc28bQ8CEG5 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28bQ8CEG5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.46■□□□□ 0.39
Ccdc28bQ8CEG5 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc28bQ8CEG5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc28bQ8CEG5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc28bQ8CEG5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28bQ8CEG5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28bQ8CEG5 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28bQ8CEG5 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28bQ8CEG5 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc28bQ8CEG5 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28bQ8CEG5 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28bQ8CEG5 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ccdc28bQ8CEG5 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28bQ8CEG5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc28bQ8CEG5 Gm13216-201ENSMUST00000117145 591 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms