Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Nup88Q8CEC0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Gm11249-201ENSMUST00000117071 859 ntBASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Nup88Q8CEC0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nup88Q8CEC0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Nup88Q8CEC0 Gm21596-201ENSMUST00000178049 1316 ntBASIC20.84■□□□□ 0.93
Nup88Q8CEC0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nup88Q8CEC0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nup88Q8CEC0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Nup88Q8CEC0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.84■□□□□ 0.93
Nup88Q8CEC0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Nup88Q8CEC0 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.84■□□□□ 0.93
Nup88Q8CEC0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nup88Q8CEC0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Nup88Q8CEC0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nup88Q8CEC0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nup88Q8CEC0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nup88Q8CEC0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nup88Q8CEC0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nup88Q8CEC0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nup88Q8CEC0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Nup88Q8CEC0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.83■□□□□ 0.93
Nup88Q8CEC0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nup88Q8CEC0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Nup88Q8CEC0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Nup88Q8CEC0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.83■□□□□ 0.93
Nup88Q8CEC0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Nup88Q8CEC0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nup88Q8CEC0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nup88Q8CEC0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nup88Q8CEC0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nup88Q8CEC0 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.83■□□□□ 0.92
Nup88Q8CEC0 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup88Q8CEC0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.82■□□□□ 0.92
Nup88Q8CEC0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup88Q8CEC0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup88Q8CEC0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.82■□□□□ 0.92
Nup88Q8CEC0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup88Q8CEC0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup88Q8CEC0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup88Q8CEC0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup88Q8CEC0 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nup88Q8CEC0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nup88Q8CEC0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Gm18666-201ENSMUST00000190039 958 ntBASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nup88Q8CEC0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Mir6982-201ENSMUST00000184354 68 ntBASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Mir7071-201ENSMUST00000184847 69 ntBASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nup88Q8CEC0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nup88Q8CEC0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms