Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Vcpip1Q8CDG3 Gm12441-201ENSMUST00000121806 588 ntBASIC19.01■□□□□ 0.63
Vcpip1Q8CDG3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vcpip1Q8CDG3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vcpip1Q8CDG3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vcpip1Q8CDG3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vcpip1Q8CDG3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Vcpip1Q8CDG3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vcpip1Q8CDG3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vcpip1Q8CDG3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 AC140264.2-202ENSMUST00000218746 817 ntBASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Vcpip1Q8CDG3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vcpip1Q8CDG3 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Gm10653-202ENSMUST00000139570 835 ntBASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vcpip1Q8CDG3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vcpip1Q8CDG3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vcpip1Q8CDG3 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms