Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Haglr-201ENSMUST00000100000 2085 ntBASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Lysmd4Q8CC84 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Lysmd4Q8CC84 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Gm9988-201ENSMUST00000069786 435 ntBASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Lysmd4Q8CC84 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Lysmd4Q8CC84 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Lysmd4Q8CC84 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Lysmd4Q8CC84 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms