Protein–RNA interactions for Protein: Q8CC12

Cdan1, Codanin-1, mousemouse

Predictions only

Length 1,239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdan1Q8CC12 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdan1Q8CC12 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdan1Q8CC12 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.29■□□□□ 0.84
Cdan1Q8CC12 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdan1Q8CC12 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cdan1Q8CC12 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.27■□□□□ 0.84
Cdan1Q8CC12 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.27■□□□□ 0.84
Cdan1Q8CC12 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdan1Q8CC12 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdan1Q8CC12 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdan1Q8CC12 Gm7977-201ENSMUST00000193787 748 ntBASIC20.27■□□□□ 0.84
Cdan1Q8CC12 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cdan1Q8CC12 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdan1Q8CC12 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdan1Q8CC12 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdan1Q8CC12 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cdan1Q8CC12 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdan1Q8CC12 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdan1Q8CC12 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdan1Q8CC12 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC20.27■□□□□ 0.84
Cdan1Q8CC12 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.27■□□□□ 0.83
Cdan1Q8CC12 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.26■□□□□ 0.83
Cdan1Q8CC12 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdan1Q8CC12 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdan1Q8CC12 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Cdan1Q8CC12 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdan1Q8CC12 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.25■□□□□ 0.83
Cdan1Q8CC12 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdan1Q8CC12 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.25■□□□□ 0.83
Cdan1Q8CC12 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.25■□□□□ 0.83
Cdan1Q8CC12 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cdan1Q8CC12 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cdan1Q8CC12 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdan1Q8CC12 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdan1Q8CC12 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Cdan1Q8CC12 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdan1Q8CC12 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdan1Q8CC12 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdan1Q8CC12 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cdan1Q8CC12 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdan1Q8CC12 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.24■□□□□ 0.83
Cdan1Q8CC12 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.24■□□□□ 0.83
Cdan1Q8CC12 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdan1Q8CC12 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Cdan1Q8CC12 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Cdan1Q8CC12 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdan1Q8CC12 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdan1Q8CC12 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdan1Q8CC12 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdan1Q8CC12 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdan1Q8CC12 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdan1Q8CC12 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms