Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim9Q8C7M3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim9Q8C7M3 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim9Q8C7M3 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.52■□□□□ 0.72
Trim9Q8C7M3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim9Q8C7M3 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim9Q8C7M3 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim9Q8C7M3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim9Q8C7M3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim9Q8C7M3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim9Q8C7M3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim9Q8C7M3 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim9Q8C7M3 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim9Q8C7M3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim9Q8C7M3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim9Q8C7M3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.52■□□□□ 0.72
Trim9Q8C7M3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim9Q8C7M3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim9Q8C7M3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim9Q8C7M3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim9Q8C7M3 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim9Q8C7M3 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Trim9Q8C7M3 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim9Q8C7M3 Gm11643-201ENSMUST00000119578 864 ntBASIC19.51■□□□□ 0.71
Trim9Q8C7M3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.51■□□□□ 0.71
Trim9Q8C7M3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.51■□□□□ 0.71
Trim9Q8C7M3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim9Q8C7M3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim9Q8C7M3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim9Q8C7M3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim9Q8C7M3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim9Q8C7M3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim9Q8C7M3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim9Q8C7M3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Trmt13-210ENSMUST00000198454 880 ntBASIC19.5■□□□□ 0.71
Trim9Q8C7M3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim9Q8C7M3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim9Q8C7M3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim9Q8C7M3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Trim9Q8C7M3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim9Q8C7M3 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim9Q8C7M3 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.49■□□□□ 0.71
Trim9Q8C7M3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim9Q8C7M3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim9Q8C7M3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim9Q8C7M3 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim9Q8C7M3 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim9Q8C7M3 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim9Q8C7M3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim9Q8C7M3 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.48■□□□□ 0.71
Trim9Q8C7M3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim9Q8C7M3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trim9Q8C7M3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim9Q8C7M3 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim9Q8C7M3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Trim9Q8C7M3 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.48■□□□□ 0.71
Trim9Q8C7M3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim9Q8C7M3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Trim9Q8C7M3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim9Q8C7M3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim9Q8C7M3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trim9Q8C7M3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim9Q8C7M3 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim9Q8C7M3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms