Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc60Q8C4J0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc60Q8C4J0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc60Q8C4J0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc60Q8C4J0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ccdc60Q8C4J0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC22.58■■□□□ 1.2
Ccdc60Q8C4J0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
Ccdc60Q8C4J0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc60Q8C4J0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc60Q8C4J0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc60Q8C4J0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
Ccdc60Q8C4J0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc60Q8C4J0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc60Q8C4J0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc60Q8C4J0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc60Q8C4J0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.57■■□□□ 1.2
Ccdc60Q8C4J0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc60Q8C4J0 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc60Q8C4J0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc60Q8C4J0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc60Q8C4J0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc60Q8C4J0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ccdc60Q8C4J0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc60Q8C4J0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Ccdc60Q8C4J0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc60Q8C4J0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc60Q8C4J0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc60Q8C4J0 Gm11643-201ENSMUST00000119578 864 ntBASIC22.56■■□□□ 1.2
Ccdc60Q8C4J0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Ccdc60Q8C4J0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC22.56■■□□□ 1.2
Ccdc60Q8C4J0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC22.56■■□□□ 1.2
Ccdc60Q8C4J0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc60Q8C4J0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc60Q8C4J0 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc60Q8C4J0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ccdc60Q8C4J0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Gm10418-201ENSMUST00000100943 576 ntBASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ccdc60Q8C4J0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Ccdc60Q8C4J0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc60Q8C4J0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc60Q8C4J0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc60Q8C4J0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc60Q8C4J0 Gm6576-201ENSMUST00000169678 883 ntBASIC22.53■■□□□ 1.2
Ccdc60Q8C4J0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC22.53■■□□□ 1.2
Ccdc60Q8C4J0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc60Q8C4J0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc60Q8C4J0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc60Q8C4J0 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Ccdc60Q8C4J0 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC22.52■■□□□ 1.2
Ccdc60Q8C4J0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC22.52■■□□□ 1.2
Ccdc60Q8C4J0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Ccdc60Q8C4J0 Gm37194-201ENSMUST00000193092 3031 ntBASIC22.52■■□□□ 1.2
Ccdc60Q8C4J0 Gm12382-201ENSMUST00000122005 922 ntBASIC22.52■■□□□ 1.2
Ccdc60Q8C4J0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc60Q8C4J0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc60Q8C4J0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Ccdc60Q8C4J0 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc60Q8C4J0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc60Q8C4J0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Ccdc60Q8C4J0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Ccdc60Q8C4J0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Ccdc60Q8C4J0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ccdc60Q8C4J0 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ccdc60Q8C4J0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ccdc60Q8C4J0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ccdc60Q8C4J0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ccdc60Q8C4J0 Gm10812-201ENSMUST00000099864 546 ntBASIC22.51■■□□□ 1.19
Ccdc60Q8C4J0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ccdc60Q8C4J0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms