Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Eri3Q8C460 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Eri3Q8C460 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Eri3Q8C460 Gm20760-201ENSMUST00000179197 648 ntBASIC16.84■□□□□ 0.29
Eri3Q8C460 Gm18666-201ENSMUST00000190039 958 ntBASIC16.84■□□□□ 0.29
Eri3Q8C460 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.84■□□□□ 0.29
Eri3Q8C460 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.84■□□□□ 0.29
Eri3Q8C460 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Eri3Q8C460 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Eri3Q8C460 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Eri3Q8C460 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Eri3Q8C460 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Eri3Q8C460 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Eri3Q8C460 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Eri3Q8C460 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Eri3Q8C460 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Eri3Q8C460 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Eri3Q8C460 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Eri3Q8C460 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Eri3Q8C460 Gm15375-201ENSMUST00000119510 849 ntBASIC16.83■□□□□ 0.28
Eri3Q8C460 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Eri3Q8C460 Mir2861-201ENSMUST00000175539 82 ntBASIC16.83■□□□□ 0.28
Eri3Q8C460 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.83■□□□□ 0.28
Eri3Q8C460 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Eri3Q8C460 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Eri3Q8C460 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.83■□□□□ 0.28
Eri3Q8C460 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Eri3Q8C460 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Eri3Q8C460 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Eri3Q8C460 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Eri3Q8C460 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Eri3Q8C460 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.82■□□□□ 0.28
Eri3Q8C460 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Eri3Q8C460 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Eri3Q8C460 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.82■□□□□ 0.28
Eri3Q8C460 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Eri3Q8C460 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Eri3Q8C460 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Eri3Q8C460 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Eri3Q8C460 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Eri3Q8C460 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Eri3Q8C460 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Eri3Q8C460 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Eri3Q8C460 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Eri3Q8C460 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.81■□□□□ 0.28
Eri3Q8C460 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.81■□□□□ 0.28
Eri3Q8C460 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Eri3Q8C460 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Eri3Q8C460 Mir6349-201ENSMUST00000184059 97 ntBASIC16.81■□□□□ 0.28
Eri3Q8C460 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Eri3Q8C460 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Eri3Q8C460 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Eri3Q8C460 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Eri3Q8C460 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Eri3Q8C460 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Eri3Q8C460 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Eri3Q8C460 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Eri3Q8C460 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Eri3Q8C460 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Eri3Q8C460 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Eri3Q8C460 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Eri3Q8C460 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Eri3Q8C460 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Eri3Q8C460 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Eri3Q8C460 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Eri3Q8C460 Gm27011-201ENSMUST00000182352 972 ntBASIC16.8■□□□□ 0.28
Eri3Q8C460 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.8■□□□□ 0.28
Eri3Q8C460 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Eri3Q8C460 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.8■□□□□ 0.28
Eri3Q8C460 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Eri3Q8C460 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Eri3Q8C460 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Eri3Q8C460 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Eri3Q8C460 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Eri3Q8C460 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Eri3Q8C460 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Eri3Q8C460 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.8■□□□□ 0.28
Eri3Q8C460 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Eri3Q8C460 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Eri3Q8C460 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.79■□□□□ 0.28
Eri3Q8C460 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.79■□□□□ 0.28
Eri3Q8C460 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Eri3Q8C460 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Eri3Q8C460 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Eri3Q8C460 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Rarb-207ENSMUST00000225921 2756 ntBASIC16.79■□□□□ 0.28
Eri3Q8C460 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Eri3Q8C460 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms