Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smim4Q8C1Q6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.85□□□□□ -0.03
Smim4Q8C1Q6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smim4Q8C1Q6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smim4Q8C1Q6 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smim4Q8C1Q6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smim4Q8C1Q6 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smim4Q8C1Q6 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smim4Q8C1Q6 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim4Q8C1Q6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smim4Q8C1Q6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smim4Q8C1Q6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
Smim4Q8C1Q6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Smim4Q8C1Q6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smim4Q8C1Q6 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smim4Q8C1Q6 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smim4Q8C1Q6 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim4Q8C1Q6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim4Q8C1Q6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim4Q8C1Q6 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smim4Q8C1Q6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.83□□□□□ -0.04
Smim4Q8C1Q6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.83□□□□□ -0.04
Smim4Q8C1Q6 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim4Q8C1Q6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.83□□□□□ -0.04
Smim4Q8C1Q6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smim4Q8C1Q6 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.83□□□□□ -0.04
Smim4Q8C1Q6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Smim4Q8C1Q6 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim4Q8C1Q6 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim4Q8C1Q6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim4Q8C1Q6 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim4Q8C1Q6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.81□□□□□ -0.04
Smim4Q8C1Q6 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim4Q8C1Q6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smim4Q8C1Q6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim4Q8C1Q6 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim4Q8C1Q6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.8□□□□□ -0.04
Smim4Q8C1Q6 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smim4Q8C1Q6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smim4Q8C1Q6 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms