Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.93■□□□□ 0.46
Usp43Q8BUM9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Gm11643-201ENSMUST00000119578 864 ntBASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Usp43Q8BUM9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp43Q8BUM9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Usp43Q8BUM9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp43Q8BUM9 Gm13401-201ENSMUST00000117074 291 ntBASIC17.91■□□□□ 0.46
Usp43Q8BUM9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.91■□□□□ 0.46
Usp43Q8BUM9 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp43Q8BUM9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp43Q8BUM9 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp43Q8BUM9 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.91■□□□□ 0.46
Usp43Q8BUM9 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp43Q8BUM9 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp43Q8BUM9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp43Q8BUM9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
Usp43Q8BUM9 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp43Q8BUM9 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Usp43Q8BUM9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.91■□□□□ 0.46
Usp43Q8BUM9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp43Q8BUM9 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp43Q8BUM9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Usp43Q8BUM9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp43Q8BUM9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.9■□□□□ 0.46
Usp43Q8BUM9 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp43Q8BUM9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Usp43Q8BUM9 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Usp43Q8BUM9 Mir8112-201ENSMUST00000184382 131 ntBASIC17.9■□□□□ 0.46
Usp43Q8BUM9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp43Q8BUM9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp43Q8BUM9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp43Q8BUM9 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp43Q8BUM9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Usp43Q8BUM9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Usp43Q8BUM9 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Usp43Q8BUM9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Gm18666-201ENSMUST00000190039 958 ntBASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.89■□□□□ 0.45
Usp43Q8BUM9 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Usp43Q8BUM9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp43Q8BUM9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Usp43Q8BUM9 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.88■□□□□ 0.45
Usp43Q8BUM9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Usp43Q8BUM9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.88■□□□□ 0.45
Usp43Q8BUM9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Usp43Q8BUM9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms