Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cdk5rap1Q8BTW8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap1Q8BTW8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Cdk5rap1Q8BTW8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Cdk5rap1Q8BTW8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Cdk5rap1Q8BTW8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap1Q8BTW8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.78■□□□□ 0.28
Cdk5rap1Q8BTW8 Gm29791-202ENSMUST00000207888 369 ntBASIC16.78■□□□□ 0.28
Cdk5rap1Q8BTW8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap1Q8BTW8 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap1Q8BTW8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap1Q8BTW8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap1Q8BTW8 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap1Q8BTW8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cdk5rap1Q8BTW8 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap1Q8BTW8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap1Q8BTW8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap1Q8BTW8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.77■□□□□ 0.28
Cdk5rap1Q8BTW8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Cdk5rap1Q8BTW8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap1Q8BTW8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.77■□□□□ 0.28
Cdk5rap1Q8BTW8 Gm43799-201ENSMUST00000201845 579 ntBASIC16.77■□□□□ 0.28
Cdk5rap1Q8BTW8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap1Q8BTW8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap1Q8BTW8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cdk5rap1Q8BTW8 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.77■□□□□ 0.28
Cdk5rap1Q8BTW8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cdk5rap1Q8BTW8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Gm4974-201ENSMUST00000209974 875 ntBASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cdk5rap1Q8BTW8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Gm6433-201ENSMUST00000118634 875 ntBASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cdk5rap1Q8BTW8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.74■□□□□ 0.27
Cdk5rap1Q8BTW8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms