Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpsf4Q8BQZ5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpsf4Q8BQZ5 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Gm37856-201ENSMUST00000191634 999 ntBASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpsf4Q8BQZ5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Cpsf4Q8BQZ5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cpsf4Q8BQZ5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cpsf4Q8BQZ5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.14■□□□□ 0.34
Cpsf4Q8BQZ5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Gm12896-201ENSMUST00000118430 226 ntBASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Gm27275-201ENSMUST00000184318 272 ntBASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Gm44549-201ENSMUST00000208351 577 ntBASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Tgds-204ENSMUST00000228543 1594 ntBASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpsf4Q8BQZ5 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpsf4Q8BQZ5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms