Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf18Q8BM39 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.86■□□□□ 0.29
Prpf18Q8BM39 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Prpf18Q8BM39 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf18Q8BM39 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf18Q8BM39 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf18Q8BM39 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf18Q8BM39 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf18Q8BM39 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf18Q8BM39 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf18Q8BM39 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf18Q8BM39 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf18Q8BM39 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Prpf18Q8BM39 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf18Q8BM39 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf18Q8BM39 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf18Q8BM39 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf18Q8BM39 Gm38205-201ENSMUST00000192243 258 ntBASIC16.85■□□□□ 0.29
Prpf18Q8BM39 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.85■□□□□ 0.29
Prpf18Q8BM39 Gm9988-201ENSMUST00000069786 435 ntBASIC16.85■□□□□ 0.29
Prpf18Q8BM39 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf18Q8BM39 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.85■□□□□ 0.29
Prpf18Q8BM39 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf18Q8BM39 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf18Q8BM39 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.85■□□□□ 0.29
Prpf18Q8BM39 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf18Q8BM39 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf18Q8BM39 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf18Q8BM39 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf18Q8BM39 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf18Q8BM39 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf18Q8BM39 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Prpf18Q8BM39 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf18Q8BM39 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.84■□□□□ 0.29
Prpf18Q8BM39 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.84■□□□□ 0.29
Prpf18Q8BM39 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf18Q8BM39 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf18Q8BM39 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Prpf18Q8BM39 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Prpf18Q8BM39 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Prpf18Q8BM39 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Prpf18Q8BM39 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Prpf18Q8BM39 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Prpf18Q8BM39 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf18Q8BM39 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf18Q8BM39 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf18Q8BM39 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Prpf18Q8BM39 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms