Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Col16a1Q8BLX7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Col16a1Q8BLX7 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC23.35■■□□□ 1.33
Col16a1Q8BLX7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC23.35■■□□□ 1.33
Col16a1Q8BLX7 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col16a1Q8BLX7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Col16a1Q8BLX7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col16a1Q8BLX7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col16a1Q8BLX7 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Col16a1Q8BLX7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Col16a1Q8BLX7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
Col16a1Q8BLX7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Col16a1Q8BLX7 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col16a1Q8BLX7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC23.33■■□□□ 1.33
Col16a1Q8BLX7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Col16a1Q8BLX7 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col16a1Q8BLX7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
Col16a1Q8BLX7 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Col16a1Q8BLX7 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC23.32■■□□□ 1.32
Col16a1Q8BLX7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col16a1Q8BLX7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col16a1Q8BLX7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC23.32■■□□□ 1.32
Col16a1Q8BLX7 Mir8112-201ENSMUST00000184382 131 ntBASIC23.32■■□□□ 1.32
Col16a1Q8BLX7 Gm34391-201ENSMUST00000203706 907 ntBASIC23.32■■□□□ 1.32
Col16a1Q8BLX7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Col16a1Q8BLX7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Col16a1Q8BLX7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Col16a1Q8BLX7 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col16a1Q8BLX7 Gm24589-201ENSMUST00000116692 94 ntBASIC23.31■■□□□ 1.32
Col16a1Q8BLX7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Col16a1Q8BLX7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Col16a1Q8BLX7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Col16a1Q8BLX7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col16a1Q8BLX7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col16a1Q8BLX7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col16a1Q8BLX7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC23.31■■□□□ 1.32
Col16a1Q8BLX7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Col16a1Q8BLX7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col16a1Q8BLX7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Col16a1Q8BLX7 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Col16a1Q8BLX7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
Col16a1Q8BLX7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col16a1Q8BLX7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col16a1Q8BLX7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col16a1Q8BLX7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col16a1Q8BLX7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col16a1Q8BLX7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col16a1Q8BLX7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Col16a1Q8BLX7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col16a1Q8BLX7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col16a1Q8BLX7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Col16a1Q8BLX7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.29■■□□□ 1.32
Col16a1Q8BLX7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Col16a1Q8BLX7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC23.29■■□□□ 1.32
Col16a1Q8BLX7 Gm27742-201ENSMUST00000184667 60 ntBASIC23.29■■□□□ 1.32
Col16a1Q8BLX7 AC120002.2-201ENSMUST00000220205 773 ntBASIC23.29■■□□□ 1.32
Col16a1Q8BLX7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC23.29■■□□□ 1.32
Col16a1Q8BLX7 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col16a1Q8BLX7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC23.28■■□□□ 1.32
Col16a1Q8BLX7 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col16a1Q8BLX7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col16a1Q8BLX7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col16a1Q8BLX7 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col16a1Q8BLX7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col16a1Q8BLX7 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col16a1Q8BLX7 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col16a1Q8BLX7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC23.28■■□□□ 1.32
Col16a1Q8BLX7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Col16a1Q8BLX7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col16a1Q8BLX7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col16a1Q8BLX7 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Spr-ps1-201ENSMUST00000089584 605 ntBASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC23.27■■□□□ 1.32
Col16a1Q8BLX7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Col16a1Q8BLX7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Col16a1Q8BLX7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC23.26■■□□□ 1.31
Col16a1Q8BLX7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col16a1Q8BLX7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC23.26■■□□□ 1.31
Col16a1Q8BLX7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC23.26■■□□□ 1.31
Col16a1Q8BLX7 Gm26039-201ENSMUST00000158152 144 ntBASIC23.26■■□□□ 1.31
Col16a1Q8BLX7 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Col16a1Q8BLX7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col16a1Q8BLX7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms