Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcal1Q8BJL0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcal1Q8BJL0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Smarcal1Q8BJL0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcal1Q8BJL0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcal1Q8BJL0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcal1Q8BJL0 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcal1Q8BJL0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.83■□□□□ 0.6
Smarcal1Q8BJL0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Smarcal1Q8BJL0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcal1Q8BJL0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcal1Q8BJL0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcal1Q8BJL0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcal1Q8BJL0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcal1Q8BJL0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcal1Q8BJL0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Smarcal1Q8BJL0 Gm29791-202ENSMUST00000207888 369 ntBASIC18.82■□□□□ 0.6
Smarcal1Q8BJL0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Smarcal1Q8BJL0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcal1Q8BJL0 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcal1Q8BJL0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Smarcal1Q8BJL0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Smarcal1Q8BJL0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Gm13401-201ENSMUST00000117074 291 ntBASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Gm7791-201ENSMUST00000219066 539 ntBASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Smarcal1Q8BJL0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Smarcal1Q8BJL0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Smarcal1Q8BJL0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Gm37025-201ENSMUST00000195159 829 ntBASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Il3ra-202ENSMUST00000223589 738 ntBASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Smarcal1Q8BJL0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcal1Q8BJL0 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcal1Q8BJL0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.77■□□□□ 0.6
Smarcal1Q8BJL0 Mir1668-201ENSMUST00000184114 107 ntBASIC18.77■□□□□ 0.6
Smarcal1Q8BJL0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Smarcal1Q8BJL0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcal1Q8BJL0 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smarcal1Q8BJL0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms