Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmbox1Q8BJA3 Gm2399-201ENSMUST00000104944 225 ntBASIC17.28■□□□□ 0.36
Hmbox1Q8BJA3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Hmbox1Q8BJA3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmbox1Q8BJA3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmbox1Q8BJA3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmbox1Q8BJA3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Hmbox1Q8BJA3 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmbox1Q8BJA3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Hmbox1Q8BJA3 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hmbox1Q8BJA3 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmbox1Q8BJA3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmbox1Q8BJA3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmbox1Q8BJA3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hmbox1Q8BJA3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.27■□□□□ 0.36
Hmbox1Q8BJA3 Gm10517-202ENSMUST00000192970 758 ntBASIC17.27■□□□□ 0.36
Hmbox1Q8BJA3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Hmbox1Q8BJA3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmbox1Q8BJA3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hmbox1Q8BJA3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmbox1Q8BJA3 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Hmbox1Q8BJA3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmbox1Q8BJA3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmbox1Q8BJA3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmbox1Q8BJA3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hmbox1Q8BJA3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmbox1Q8BJA3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Hmbox1Q8BJA3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmbox1Q8BJA3 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmbox1Q8BJA3 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.26■□□□□ 0.35
Hmbox1Q8BJA3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmbox1Q8BJA3 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Hmbox1Q8BJA3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Hmbox1Q8BJA3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmbox1Q8BJA3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmbox1Q8BJA3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.26■□□□□ 0.35
Hmbox1Q8BJA3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hmbox1Q8BJA3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hmbox1Q8BJA3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 Gm13158-201ENSMUST00000122007 736 ntBASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 Gm44549-201ENSMUST00000208351 577 ntBASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hmbox1Q8BJA3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Gm6659-201ENSMUST00000174752 547 ntBASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmbox1Q8BJA3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Hmbox1Q8BJA3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmbox1Q8BJA3 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms