Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn3Q8BHH8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn3Q8BHH8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn3Q8BHH8 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn3Q8BHH8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC16.6■□□□□ 0.25
Clrn3Q8BHH8 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.6■□□□□ 0.25
Clrn3Q8BHH8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.6■□□□□ 0.25
Clrn3Q8BHH8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Clrn3Q8BHH8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.6■□□□□ 0.25
Clrn3Q8BHH8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn3Q8BHH8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn3Q8BHH8 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.6■□□□□ 0.25
Clrn3Q8BHH8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Clrn3Q8BHH8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clrn3Q8BHH8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Clrn3Q8BHH8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clrn3Q8BHH8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Clrn3Q8BHH8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.59■□□□□ 0.25
Clrn3Q8BHH8 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.59■□□□□ 0.25
Clrn3Q8BHH8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clrn3Q8BHH8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clrn3Q8BHH8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Clrn3Q8BHH8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clrn3Q8BHH8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clrn3Q8BHH8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clrn3Q8BHH8 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Clrn3Q8BHH8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.59■□□□□ 0.25
Clrn3Q8BHH8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Clrn3Q8BHH8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clrn3Q8BHH8 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clrn3Q8BHH8 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Clrn3Q8BHH8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clrn3Q8BHH8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clrn3Q8BHH8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clrn3Q8BHH8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
Clrn3Q8BHH8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Clrn3Q8BHH8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Gm38285-201ENSMUST00000192928 922 ntBASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Gm2559-201ENSMUST00000201323 363 ntBASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Clrn3Q8BHH8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
Clrn3Q8BHH8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn3Q8BHH8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn3Q8BHH8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn3Q8BHH8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Clrn3Q8BHH8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn3Q8BHH8 Gm12441-201ENSMUST00000121806 588 ntBASIC16.57■□□□□ 0.24
Clrn3Q8BHH8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn3Q8BHH8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.57■□□□□ 0.24
Clrn3Q8BHH8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.57■□□□□ 0.24
Clrn3Q8BHH8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn3Q8BHH8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn3Q8BHH8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn3Q8BHH8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Clrn3Q8BHH8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Clrn3Q8BHH8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Zfp783-201ENSMUST00000095946 670 ntBASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Clrn3Q8BHH8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Clrn3Q8BHH8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn3Q8BHH8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn3Q8BHH8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn3Q8BHH8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn3Q8BHH8 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn3Q8BHH8 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn3Q8BHH8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Clrn3Q8BHH8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.55■□□□□ 0.24
Clrn3Q8BHH8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn3Q8BHH8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn3Q8BHH8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clrn3Q8BHH8 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms