Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smndc1Q8BGT7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smndc1Q8BGT7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Smndc1Q8BGT7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smndc1Q8BGT7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smndc1Q8BGT7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Smndc1Q8BGT7 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.17■□□□□ 0.34
Smndc1Q8BGT7 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smndc1Q8BGT7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Smndc1Q8BGT7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Smndc1Q8BGT7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smndc1Q8BGT7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smndc1Q8BGT7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smndc1Q8BGT7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smndc1Q8BGT7 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smndc1Q8BGT7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smndc1Q8BGT7 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smndc1Q8BGT7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smndc1Q8BGT7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smndc1Q8BGT7 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Smndc1Q8BGT7 Gm7291-201ENSMUST00000199147 382 ntBASIC17.16■□□□□ 0.34
Smndc1Q8BGT7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smndc1Q8BGT7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smndc1Q8BGT7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smndc1Q8BGT7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Smndc1Q8BGT7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Smndc1Q8BGT7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smndc1Q8BGT7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Smndc1Q8BGT7 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Smndc1Q8BGT7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smndc1Q8BGT7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Smndc1Q8BGT7 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smndc1Q8BGT7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Smndc1Q8BGT7 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.15■□□□□ 0.34
Smndc1Q8BGT7 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smndc1Q8BGT7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Smndc1Q8BGT7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Smndc1Q8BGT7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smndc1Q8BGT7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.14■□□□□ 0.33
Smndc1Q8BGT7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smndc1Q8BGT7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smndc1Q8BGT7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smndc1Q8BGT7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.14■□□□□ 0.33
Smndc1Q8BGT7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.14■□□□□ 0.33
Smndc1Q8BGT7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.14■□□□□ 0.33
Smndc1Q8BGT7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smndc1Q8BGT7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.14■□□□□ 0.33
Smndc1Q8BGT7 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Smndc1Q8BGT7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smndc1Q8BGT7 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Smndc1Q8BGT7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Smndc1Q8BGT7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Smndc1Q8BGT7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 Gm27801-201ENSMUST00000184174 223 ntBASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 Gm27405-201ENSMUST00000184201 112 ntBASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Smndc1Q8BGT7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Gm29257-201ENSMUST00000186115 639 ntBASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Smndc1Q8BGT7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms