Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Samm50Q8BGH2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Samm50Q8BGH2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Samm50Q8BGH2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Samm50Q8BGH2 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Samm50Q8BGH2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Samm50Q8BGH2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Samm50Q8BGH2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Samm50Q8BGH2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.72■□□□□ 0.91
Samm50Q8BGH2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.72■□□□□ 0.91
Samm50Q8BGH2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Samm50Q8BGH2 Gm43294-201ENSMUST00000202850 2490 ntBASIC20.72■□□□□ 0.91
Samm50Q8BGH2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Samm50Q8BGH2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Samm50Q8BGH2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Samm50Q8BGH2 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Samm50Q8BGH2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Samm50Q8BGH2 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Samm50Q8BGH2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Samm50Q8BGH2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Samm50Q8BGH2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Samm50Q8BGH2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Samm50Q8BGH2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Samm50Q8BGH2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Samm50Q8BGH2 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Samm50Q8BGH2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.7■□□□□ 0.9
Samm50Q8BGH2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Samm50Q8BGH2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Samm50Q8BGH2 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Samm50Q8BGH2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Samm50Q8BGH2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Samm50Q8BGH2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Samm50Q8BGH2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Samm50Q8BGH2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Samm50Q8BGH2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Samm50Q8BGH2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Samm50Q8BGH2 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Samm50Q8BGH2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Samm50Q8BGH2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Samm50Q8BGH2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Samm50Q8BGH2 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC20.69■□□□□ 0.9
Samm50Q8BGH2 Gm20049-201ENSMUST00000219950 730 ntBASIC20.69■□□□□ 0.9
Samm50Q8BGH2 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Samm50Q8BGH2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms