Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim6Q8BGE7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim6Q8BGE7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim6Q8BGE7 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim6Q8BGE7 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim6Q8BGE7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim6Q8BGE7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim6Q8BGE7 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.82■□□□□ 0.6
Trim6Q8BGE7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim6Q8BGE7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim6Q8BGE7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim6Q8BGE7 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trim6Q8BGE7 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim6Q8BGE7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim6Q8BGE7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Trim6Q8BGE7 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.81■□□□□ 0.6
Trim6Q8BGE7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Trim6Q8BGE7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim6Q8BGE7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim6Q8BGE7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim6Q8BGE7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim6Q8BGE7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim6Q8BGE7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim6Q8BGE7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.8■□□□□ 0.6
Trim6Q8BGE7 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.8■□□□□ 0.6
Trim6Q8BGE7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim6Q8BGE7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim6Q8BGE7 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim6Q8BGE7 Gm13234-201ENSMUST00000120010 747 ntBASIC18.8■□□□□ 0.6
Trim6Q8BGE7 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Trim6Q8BGE7 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim6Q8BGE7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Trim6Q8BGE7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim6Q8BGE7 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim6Q8BGE7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim6Q8BGE7 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trim6Q8BGE7 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim6Q8BGE7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim6Q8BGE7 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim6Q8BGE7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim6Q8BGE7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim6Q8BGE7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim6Q8BGE7 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim6Q8BGE7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim6Q8BGE7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim6Q8BGE7 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.77■□□□□ 0.6
Trim6Q8BGE7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim6Q8BGE7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim6Q8BGE7 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim6Q8BGE7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim6Q8BGE7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim6Q8BGE7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim6Q8BGE7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim6Q8BGE7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim6Q8BGE7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim6Q8BGE7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.77■□□□□ 0.6
Trim6Q8BGE7 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.77■□□□□ 0.6
Trim6Q8BGE7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trim6Q8BGE7 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.77■□□□□ 0.59
Trim6Q8BGE7 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim6Q8BGE7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim6Q8BGE7 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.77■□□□□ 0.59
Trim6Q8BGE7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim6Q8BGE7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms