Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Ubp1Q811S7 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ubp1Q811S7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ubp1Q811S7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ubp1Q811S7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubp1Q811S7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.43■□□□□ 0.38
Ubp1Q811S7 Gm8520-201ENSMUST00000186517 868 ntBASIC17.43■□□□□ 0.38
Ubp1Q811S7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubp1Q811S7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ubp1Q811S7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Ubp1Q811S7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubp1Q811S7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ubp1Q811S7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ubp1Q811S7 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubp1Q811S7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ubp1Q811S7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ubp1Q811S7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubp1Q811S7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubp1Q811S7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubp1Q811S7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC17.42■□□□□ 0.38
Ubp1Q811S7 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ubp1Q811S7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.42■□□□□ 0.38
Ubp1Q811S7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.42■□□□□ 0.38
Ubp1Q811S7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.42■□□□□ 0.38
Ubp1Q811S7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubp1Q811S7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubp1Q811S7 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.42■□□□□ 0.38
Ubp1Q811S7 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubp1Q811S7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubp1Q811S7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubp1Q811S7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubp1Q811S7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ubp1Q811S7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ubp1Q811S7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ubp1Q811S7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ubp1Q811S7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ubp1Q811S7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ubp1Q811S7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ubp1Q811S7 Gm15375-201ENSMUST00000119510 849 ntBASIC17.41■□□□□ 0.38
Ubp1Q811S7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ubp1Q811S7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.41■□□□□ 0.38
Ubp1Q811S7 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.41■□□□□ 0.38
Ubp1Q811S7 Gm22240-201ENSMUST00000175225 82 ntBASIC17.41■□□□□ 0.38
Ubp1Q811S7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.41■□□□□ 0.38
Ubp1Q811S7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.41■□□□□ 0.38
Ubp1Q811S7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ubp1Q811S7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ubp1Q811S7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ubp1Q811S7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ubp1Q811S7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ubp1Q811S7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ubp1Q811S7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.39■□□□□ 0.37
Ubp1Q811S7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ubp1Q811S7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Ubp1Q811S7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubp1Q811S7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubp1Q811S7 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubp1Q811S7 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.38■□□□□ 0.37
Ubp1Q811S7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubp1Q811S7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubp1Q811S7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.38■□□□□ 0.37
Ubp1Q811S7 Mir2861-201ENSMUST00000175539 82 ntBASIC17.38■□□□□ 0.37
Ubp1Q811S7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubp1Q811S7 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ubp1Q811S7 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms