Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vrk1Q80X41 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Gm27463-201ENSMUST00000183569 57 ntBASIC16.87■□□□□ 0.29
Vrk1Q80X41 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.87■□□□□ 0.29
Vrk1Q80X41 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Gm18959-201ENSMUST00000208954 655 ntBASIC16.87■□□□□ 0.29
Vrk1Q80X41 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vrk1Q80X41 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Vrk1Q80X41 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.86■□□□□ 0.29
Vrk1Q80X41 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vrk1Q80X41 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.86■□□□□ 0.29
Vrk1Q80X41 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Vrk1Q80X41 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vrk1Q80X41 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vrk1Q80X41 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.85■□□□□ 0.29
Vrk1Q80X41 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.85■□□□□ 0.29
Vrk1Q80X41 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Vrk1Q80X41 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vrk1Q80X41 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vrk1Q80X41 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vrk1Q80X41 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vrk1Q80X41 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.85■□□□□ 0.29
Vrk1Q80X41 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Vrk1Q80X41 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vrk1Q80X41 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vrk1Q80X41 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Vrk1Q80X41 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vrk1Q80X41 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.85■□□□□ 0.29
Vrk1Q80X41 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Vrk1Q80X41 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vrk1Q80X41 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.84■□□□□ 0.29
Vrk1Q80X41 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vrk1Q80X41 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vrk1Q80X41 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.84■□□□□ 0.29
Vrk1Q80X41 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vrk1Q80X41 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.84■□□□□ 0.29
Vrk1Q80X41 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vrk1Q80X41 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Vrk1Q80X41 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Vrk1Q80X41 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Vrk1Q80X41 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vrk1Q80X41 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.84■□□□□ 0.29
Vrk1Q80X41 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Vrk1Q80X41 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vrk1Q80X41 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Vrk1Q80X41 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.83■□□□□ 0.28
Vrk1Q80X41 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Vrk1Q80X41 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vrk1Q80X41 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Vrk1Q80X41 Gm38027-201ENSMUST00000192315 235 ntBASIC16.83■□□□□ 0.28
Vrk1Q80X41 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.83■□□□□ 0.28
Vrk1Q80X41 Gm21362-201ENSMUST00000194272 928 ntBASIC16.83■□□□□ 0.28
Vrk1Q80X41 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vrk1Q80X41 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vrk1Q80X41 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Vrk1Q80X41 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vrk1Q80X41 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vrk1Q80X41 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vrk1Q80X41 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.82■□□□□ 0.28
Vrk1Q80X41 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms