Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim62Q80V85 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim62Q80V85 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Trim62Q80V85 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Trim62Q80V85 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.33■□□□□ 0.52
Trim62Q80V85 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.33■□□□□ 0.52
Trim62Q80V85 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Trim62Q80V85 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim62Q80V85 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Trim62Q80V85 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim62Q80V85 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Trim62Q80V85 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim62Q80V85 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim62Q80V85 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim62Q80V85 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim62Q80V85 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim62Q80V85 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim62Q80V85 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.32■□□□□ 0.52
Trim62Q80V85 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim62Q80V85 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim62Q80V85 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.32■□□□□ 0.52
Trim62Q80V85 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim62Q80V85 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim62Q80V85 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Trim62Q80V85 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim62Q80V85 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.32■□□□□ 0.52
Trim62Q80V85 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim62Q80V85 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim62Q80V85 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim62Q80V85 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim62Q80V85 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim62Q80V85 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Trim62Q80V85 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim62Q80V85 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim62Q80V85 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Trim62Q80V85 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trim62Q80V85 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim62Q80V85 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.31■□□□□ 0.52
Trim62Q80V85 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim62Q80V85 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Trim62Q80V85 Mir1199-201ENSMUST00000117015 119 ntBASIC18.31■□□□□ 0.52
Trim62Q80V85 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim62Q80V85 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim62Q80V85 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim62Q80V85 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim62Q80V85 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim62Q80V85 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim62Q80V85 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim62Q80V85 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim62Q80V85 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim62Q80V85 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim62Q80V85 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Trim62Q80V85 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim62Q80V85 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim62Q80V85 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim62Q80V85 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim62Q80V85 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim62Q80V85 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trim62Q80V85 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim62Q80V85 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim62Q80V85 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim62Q80V85 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trim62Q80V85 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim62Q80V85 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim62Q80V85 Idnk-204ENSMUST00000226010 1898 ntBASIC18.29■□□□□ 0.52
Trim62Q80V85 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim62Q80V85 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim62Q80V85 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Trim62Q80V85 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim62Q80V85 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim62Q80V85 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.29■□□□□ 0.52
Trim62Q80V85 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.29■□□□□ 0.52
Trim62Q80V85 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trim62Q80V85 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim62Q80V85 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim62Q80V85 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Trim62Q80V85 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim62Q80V85 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim62Q80V85 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim62Q80V85 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim62Q80V85 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trim62Q80V85 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim62Q80V85 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim62Q80V85 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Trim62Q80V85 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim62Q80V85 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim62Q80V85 Gm13401-201ENSMUST00000117074 291 ntBASIC18.28■□□□□ 0.52
Trim62Q80V85 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim62Q80V85 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.28■□□□□ 0.52
Trim62Q80V85 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim62Q80V85 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim62Q80V85 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Trim62Q80V85 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim62Q80V85 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim62Q80V85 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Trim62Q80V85 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim62Q80V85 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.28■□□□□ 0.52
Trim62Q80V85 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim62Q80V85 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Trim62Q80V85 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms