Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rpp38Q80UU2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rpp38Q80UU2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp38Q80UU2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp38Q80UU2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rpp38Q80UU2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Rpp38Q80UU2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.67■□□□□ 0.42
Rpp38Q80UU2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.67■□□□□ 0.42
Rpp38Q80UU2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Rpp38Q80UU2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp38Q80UU2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp38Q80UU2 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp38Q80UU2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.67■□□□□ 0.42
Rpp38Q80UU2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp38Q80UU2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rpp38Q80UU2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Gm15378-201ENSMUST00000121894 207 ntBASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rpp38Q80UU2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Gm10698-201ENSMUST00000182663 604 ntBASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Gm43183-201ENSMUST00000200632 547 ntBASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rpp38Q80UU2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rpp38Q80UU2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.64■□□□□ 0.42
Rpp38Q80UU2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rpp38Q80UU2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Rpp38Q80UU2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp38Q80UU2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Rpp38Q80UU2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp38Q80UU2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp38Q80UU2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.64■□□□□ 0.41
Rpp38Q80UU2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Rpp38Q80UU2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp38Q80UU2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rpp38Q80UU2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rpp38Q80UU2 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Rpp38Q80UU2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rpp38Q80UU2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms