Protein–RNA interactions for Protein: Q80UJ7

Rab3gap1, Rab3 GTPase-activating protein catalytic subunit, mousemouse

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab3gap1Q80UJ7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rab3gap1Q80UJ7 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rab3gap1Q80UJ7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rab3gap1Q80UJ7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rab3gap1Q80UJ7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Rab3gap1Q80UJ7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rab3gap1Q80UJ7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rab3gap1Q80UJ7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rab3gap1Q80UJ7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rab3gap1Q80UJ7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Rab3gap1Q80UJ7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rab3gap1Q80UJ7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rab3gap1Q80UJ7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rab3gap1Q80UJ7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.52■■□□□ 1.04
Rab3gap1Q80UJ7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rab3gap1Q80UJ7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rab3gap1Q80UJ7 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rab3gap1Q80UJ7 Gm7889-201ENSMUST00000185591 958 ntBASIC21.52■■□□□ 1.04
Rab3gap1Q80UJ7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rab3gap1Q80UJ7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rab3gap1Q80UJ7 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rab3gap1Q80UJ7 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Rab3gap1Q80UJ7 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rab3gap1Q80UJ7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Rab3gap1Q80UJ7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rab3gap1Q80UJ7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rab3gap1Q80UJ7 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rab3gap1Q80UJ7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rab3gap1Q80UJ7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Rab3gap1Q80UJ7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rab3gap1Q80UJ7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rab3gap1Q80UJ7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC21.5■■□□□ 1.03
Rab3gap1Q80UJ7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rab3gap1Q80UJ7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC21.5■■□□□ 1.03
Rab3gap1Q80UJ7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rab3gap1Q80UJ7 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rab3gap1Q80UJ7 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Rab3gap1Q80UJ7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rab3gap1Q80UJ7 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rab3gap1Q80UJ7 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rab3gap1Q80UJ7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
Rab3gap1Q80UJ7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rab3gap1Q80UJ7 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.49■■□□□ 1.03
Rab3gap1Q80UJ7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.49■■□□□ 1.03
Rab3gap1Q80UJ7 Gm4974-201ENSMUST00000209974 875 ntBASIC21.49■■□□□ 1.03
Rab3gap1Q80UJ7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rab3gap1Q80UJ7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rab3gap1Q80UJ7 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.49■■□□□ 1.03
Rab3gap1Q80UJ7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rab3gap1Q80UJ7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rab3gap1Q80UJ7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rab3gap1Q80UJ7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rab3gap1Q80UJ7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rab3gap1Q80UJ7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rab3gap1Q80UJ7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rab3gap1Q80UJ7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rab3gap1Q80UJ7 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rab3gap1Q80UJ7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Rab3gap1Q80UJ7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rab3gap1Q80UJ7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC21.48■■□□□ 1.03
Rab3gap1Q80UJ7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Rab3gap1Q80UJ7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rab3gap1Q80UJ7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rab3gap1Q80UJ7 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
Rab3gap1Q80UJ7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
Rab3gap1Q80UJ7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rab3gap1Q80UJ7 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.46■■□□□ 1.03
Rab3gap1Q80UJ7 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms