Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Odf3b-204ENSMUST00000227834 930 ntBASIC17.39■□□□□ 0.37
Pcdh19Q80TF3 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh19Q80TF3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh19Q80TF3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh19Q80TF3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Pcdh19Q80TF3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh19Q80TF3 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh19Q80TF3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pcdh19Q80TF3 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh19Q80TF3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh19Q80TF3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh19Q80TF3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh19Q80TF3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh19Q80TF3 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh19Q80TF3 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdh19Q80TF3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh19Q80TF3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC17.38■□□□□ 0.37
Pcdh19Q80TF3 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh19Q80TF3 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh19Q80TF3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh19Q80TF3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh19Q80TF3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh19Q80TF3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pcdh19Q80TF3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Gm21814-202ENSMUST00000203277 873 ntBASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdh19Q80TF3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Gm30025-201ENSMUST00000218555 728 ntBASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdh19Q80TF3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdh19Q80TF3 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.34■□□□□ 0.37
Pcdh19Q80TF3 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Pcdh19Q80TF3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh19Q80TF3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh19Q80TF3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh19Q80TF3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh19Q80TF3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh19Q80TF3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh19Q80TF3 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdh19Q80TF3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh19Q80TF3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Pcdh19Q80TF3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh19Q80TF3 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh19Q80TF3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh19Q80TF3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh19Q80TF3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh19Q80TF3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdh19Q80TF3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms