Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdh8Q7TSK3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Gm7977-201ENSMUST00000193787 748 ntBASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdh8Q7TSK3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.46■□□□□ 0.39
Pcdh8Q7TSK3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdh8Q7TSK3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh8Q7TSK3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh8Q7TSK3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh8Q7TSK3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh8Q7TSK3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh8Q7TSK3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh8Q7TSK3 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh8Q7TSK3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC17.45■□□□□ 0.38
Pcdh8Q7TSK3 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.45■□□□□ 0.38
Pcdh8Q7TSK3 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.45■□□□□ 0.38
Pcdh8Q7TSK3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.45■□□□□ 0.38
Pcdh8Q7TSK3 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh8Q7TSK3 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh8Q7TSK3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdh8Q7TSK3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdh8Q7TSK3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh8Q7TSK3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh8Q7TSK3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh8Q7TSK3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdh8Q7TSK3 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.44■□□□□ 0.38
Pcdh8Q7TSK3 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.44■□□□□ 0.38
Pcdh8Q7TSK3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Pcdh8Q7TSK3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh8Q7TSK3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh8Q7TSK3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdh8Q7TSK3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh8Q7TSK3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh8Q7TSK3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdh8Q7TSK3 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
Pcdh8Q7TSK3 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms